| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1181 |
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| Symbol | |
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| ID | 5868941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1341043 |
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| End bp | 1342296 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641546281 |
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| Product | integrase family protein |
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| Protein accession | YP_001667425 |
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| Protein GI | 167032194 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.588038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCCGAG AGCGCATCAC AAGTGGCCTA GAGGCCGAAC TGGCTAAGCA CACTGGCATC
GAGATTCACG GTGGCAATCT GCGAATCGTC TTCATGTGGC GCCGCATCCG CTGCCGCGAG
TCTCTCGGCC TACCGGTAAC CAAAGCCAAC ATCAAACACG CCGCTCTTCT CAGGGCGGCG
ATTCTTCACG AAATCAAACT TGGCACCTTC GAGTATGGAC GGCACTTCCC GAACTCGAAG
CATGCAACCA ACTACAGCAA TGCGAAGGAC GAACGCCTAG AGGCACTGGC AGAGCGGTAC
AAACCTCTCA AGGCCATCGA CATTACCCCA ATGACCGAGG AGAAATACGC CTACGCTATC
GACATTTGTG TGGCCCTGGT TGGCGGGGAT CGGCTGGCTG GAATCTTGCT GCCTGAAGAC
ATCCACGTTC TTCGCGCCCG CCTGATAGAA ACGCGGGCGC CATCTACTGC CAACCACTAT
CTTGCCACCT TCGCAGGCTT TCTAACCTGG TGCGAGAGCA ATAACTACTG CATGGCCGGT
CTCGCCGGCG CCTGCACACG ATTCGCAATG AGTGACAAGG AACCTGACCC GCTTACCCAT
GATGAGTTCG ATCTGCTCAT CTCGAACGGG TGCCTGCACC CCCAAGATGC TGCTGCCATT
ACGCTGGCGG TGTACACCGG ATTGCGACCA GGAGAACTCT GCGCGTTAGC GGTTGAAGAC
ATCAACCTTC AGGCTGGCAA GATAGAGATC ACCAGAGCGA TCACAGCTGA CGGCTCATTC
AAGACGCCAA AGACGGGAAA GCCTCGCACC GTACTTCTGA TGGAACCAGC TTTAGAAGCG
TGCCGTACGC TGCTTGAAAT CGTCATGAAC CATCCCAAGC GAGACATCAG GGTCTATCAA
AATCGTCATG AATGGCGGGA GATATCTGTA ACCCCTCTCC TATCACCGAG CACCCAGGCA
AGAAAAAGAG GAATCAACGA GTGGTTTGTG TCCACAGCTT GGAATACCAA ATGGGCAGCG
ATCCAGCGCA GGGCCGGCAT CAGACCTCGG CGACCCTACC AAACGCGCCA CACTTACGCA
TGCTGGTGCC TGACAGCTCG AGGCAACCTG GCGTTTATCG CAAAACAGAT GGGACACAAG
GACTTCACCA TGCTTGTGGA AGTTTATGCG AAATGGATGG ACTCAGAGTC CGACGAGGAG
CTTACTCGAA TCTGGGAGGG GATTAGTGGA AAAACAAAGC GGCTACTTAA GTAG
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| Protein sequence | MGRERITSGL EAELAKHTGI EIHGGNLRIV FMWRRIRCRE SLGLPVTKAN IKHAALLRAA
ILHEIKLGTF EYGRHFPNSK HATNYSNAKD ERLEALAERY KPLKAIDITP MTEEKYAYAI
DICVALVGGD RLAGILLPED IHVLRARLIE TRAPSTANHY LATFAGFLTW CESNNYCMAG
LAGACTRFAM SDKEPDPLTH DEFDLLISNG CLHPQDAAAI TLAVYTGLRP GELCALAVED
INLQAGKIEI TRAITADGSF KTPKTGKPRT VLLMEPALEA CRTLLEIVMN HPKRDIRVYQ
NRHEWREISV TPLLSPSTQA RKRGINEWFV STAWNTKWAA IQRRAGIRPR RPYQTRHTYA
CWCLTARGNL AFIAKQMGHK DFTMLVEVYA KWMDSESDEE LTRIWEGISG KTKRLLK
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