Gene PputGB1_1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1149 
Symbolfrr 
ID5868909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1304023 
End bp1304580 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID641546249 
Productribosome recycling factor 
Protein accessionYP_001667393 
Protein GI167032162 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG ACATCAAGAA AGACGCGCAG GAGCGCATGA CCAAGTCCCT CGAGGCCCTG 
GGCCGCAACC TGGCGGCAAT CCGCACTGGT CGCGCGCACC CAAGCATCCT GGATACCGTC
AAGGTCACTG CCTGGGGCAG CGAAATGCCG CTGAACCAGG TTGCCGCGAT CACCGTCGAA
GATGCTCGCA CCCTGAAGAT CGTCGCTCAC GACAAGAACC TCAGCGCTGC CATCGAGAAG
GCCATCCTTA CCTCCGACCT GGGCCTGAAC CCATCCAGCG CCGGTACCAC CATTCGTGTG
CCGATGCCGG CCCTGACCGA GGAAACCCGC AAGGGCTACA CCAAGCAGGC CAGCGGTGTG
GCCGAGGACG CCAAGGTAGC TGTGCGCAAC GTGCGCCGCG ACGCCCTGGC TGACCTGAAG
AAGCTGACCA AGGACAAGGA AATCAGTGAA GACGAAGAAC GTCGCGCCGC TGATGAGATC
CAGAAGCTGA CCGACAAGTT CGTTGCCGAA GTCGATGCTG CCTTCAAAGC CAAGGAAAAG
GACCTGATGG CCGTTTAA
 
Protein sequence
MINDIKKDAQ ERMTKSLEAL GRNLAAIRTG RAHPSILDTV KVTAWGSEMP LNQVAAITVE 
DARTLKIVAH DKNLSAAIEK AILTSDLGLN PSSAGTTIRV PMPALTEETR KGYTKQASGV
AEDAKVAVRN VRRDALADLK KLTKDKEISE DEERRAADEI QKLTDKFVAE VDAAFKAKEK
DLMAV