Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1114 |
Symbol | |
ID | 5868873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1263088 |
End bp | 1263957 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546213 |
Product | hypothetical protein |
Protein accession | YP_001667358 |
Protein GI | 167032127 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.718308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCAT CCCCACTGCC TTACTTTCTC GGTTGCCCGT CATGGAGCGA AAACGCCTGG CGCGACTACC TGTACCCCGC CGACGCCAGC AGCAATGAAA TGCTTGGCTT CTACAGCCAG GTGTTCAACG CCGTCGAAGG CAACACCACC TTCTACGCAC GCCCCGCCCC CGGCACCATT GCCCGCTGGG CGCAGGTGAT GCCCGCGCAC TTTCGCTTTA CCGCCAAGTT TCCAAGGGAC GTCAGCCACG AGGGCGACCT GCGCGATCAG CTTGAGCCTG CCTTCGATTT CACCCGGCTG ATGGCCCCGC TGGGCCAGCG CGTATCGCCC TACTGGCTGC AGCTTCCGGC TCAGTTCGGC CCTGCACGCC TGGGCGAGCT ATGCCACTTC CTCGATGAAA TTGCCGTGCC AGTGGCGGTG GAAGTGCGCA ACCAGGCCTT TTTCGCCAAG GGGGAGGAAG AGCGGCTGCT CAACCGCTTG CTGCACGAAC GTGGCGTCGA ACGTATCTGC CTTGACCCGC GTGCGCTGTT CAGTTGCACC TCCCGCGACC CTGCCGTGCT GCATGCGCAG TCCAAGAAGC CCAAGGTGCC GCCACGGCCG GCCGCCTTCA GCCAGCATCC GCAGGTGCGC TTCATTGGCC ATCCCGAACT GCAGGCCAAC GAAACCTTCC TTACGCCCTG GGTAGACAAG GTTGCTGGCT GGATCGAGGA GGGCCGCAAC CCGTACATCT TCCTGCACAC ATCGGACAAC CGCTTGGCAG CCGCCTTGGC TCAGCGCTTT CACCAGCGGC TGATGGCACG CCTGCCGGGC CTTGCACCTT TGCCGGAATT GCCCCGCGCG CCCGAGGTCG AACAACTGGG GCTACTCTGA
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Protein sequence | MSPSPLPYFL GCPSWSENAW RDYLYPADAS SNEMLGFYSQ VFNAVEGNTT FYARPAPGTI ARWAQVMPAH FRFTAKFPRD VSHEGDLRDQ LEPAFDFTRL MAPLGQRVSP YWLQLPAQFG PARLGELCHF LDEIAVPVAV EVRNQAFFAK GEEERLLNRL LHERGVERIC LDPRALFSCT SRDPAVLHAQ SKKPKVPPRP AAFSQHPQVR FIGHPELQAN ETFLTPWVDK VAGWIEEGRN PYIFLHTSDN RLAAALAQRF HQRLMARLPG LAPLPELPRA PEVEQLGLL
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