Gene PputGB1_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1114 
Symbol 
ID5868873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1263088 
End bp1263957 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content64% 
IMG OID641546213 
Producthypothetical protein 
Protein accessionYP_001667358 
Protein GI167032127 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.718308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCAT CCCCACTGCC TTACTTTCTC GGTTGCCCGT CATGGAGCGA AAACGCCTGG 
CGCGACTACC TGTACCCCGC CGACGCCAGC AGCAATGAAA TGCTTGGCTT CTACAGCCAG
GTGTTCAACG CCGTCGAAGG CAACACCACC TTCTACGCAC GCCCCGCCCC CGGCACCATT
GCCCGCTGGG CGCAGGTGAT GCCCGCGCAC TTTCGCTTTA CCGCCAAGTT TCCAAGGGAC
GTCAGCCACG AGGGCGACCT GCGCGATCAG CTTGAGCCTG CCTTCGATTT CACCCGGCTG
ATGGCCCCGC TGGGCCAGCG CGTATCGCCC TACTGGCTGC AGCTTCCGGC TCAGTTCGGC
CCTGCACGCC TGGGCGAGCT ATGCCACTTC CTCGATGAAA TTGCCGTGCC AGTGGCGGTG
GAAGTGCGCA ACCAGGCCTT TTTCGCCAAG GGGGAGGAAG AGCGGCTGCT CAACCGCTTG
CTGCACGAAC GTGGCGTCGA ACGTATCTGC CTTGACCCGC GTGCGCTGTT CAGTTGCACC
TCCCGCGACC CTGCCGTGCT GCATGCGCAG TCCAAGAAGC CCAAGGTGCC GCCACGGCCG
GCCGCCTTCA GCCAGCATCC GCAGGTGCGC TTCATTGGCC ATCCCGAACT GCAGGCCAAC
GAAACCTTCC TTACGCCCTG GGTAGACAAG GTTGCTGGCT GGATCGAGGA GGGCCGCAAC
CCGTACATCT TCCTGCACAC ATCGGACAAC CGCTTGGCAG CCGCCTTGGC TCAGCGCTTT
CACCAGCGGC TGATGGCACG CCTGCCGGGC CTTGCACCTT TGCCGGAATT GCCCCGCGCG
CCCGAGGTCG AACAACTGGG GCTACTCTGA
 
Protein sequence
MSPSPLPYFL GCPSWSENAW RDYLYPADAS SNEMLGFYSQ VFNAVEGNTT FYARPAPGTI 
ARWAQVMPAH FRFTAKFPRD VSHEGDLRDQ LEPAFDFTRL MAPLGQRVSP YWLQLPAQFG
PARLGELCHF LDEIAVPVAV EVRNQAFFAK GEEERLLNRL LHERGVERIC LDPRALFSCT
SRDPAVLHAQ SKKPKVPPRP AAFSQHPQVR FIGHPELQAN ETFLTPWVDK VAGWIEEGRN
PYIFLHTSDN RLAAALAQRF HQRLMARLPG LAPLPELPRA PEVEQLGLL