Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1096 |
Symbol | |
ID | 5868855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1244388 |
End bp | 1245053 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546195 |
Product | CheW protein |
Protein accession | YP_001667340 |
Protein GI | 167032109 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.153582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTG AATCCGCGAT GCAGTTGCTG GCCGAGGATG ACGCGCACAT CGACGACTGC TGGAACCGCA TTGGCGTGCA TGGCGACAAG CAGTGCCCGC TGCTGGAGCA GCATGTTCAT TGCCGCAATT GCGAGGTGTA TGCCGCCGCG GCCACGCGTT TGCTCGACCG CTATGCGCTG ATGCAGGACC ACCAGGCTGC AGTAGCGCAG CCGGTCGAAG AAAACACCGG CCGCTCCGTG CTGCTGTTCC GCCTGGGCGA AGAGTGGCTG GCGCTGGCTA CCGCCTGCCT GGCCGAGATC GCCCCGTTGC AGGCGGTGCA TTCGCTGCCG CATCAGCGCT CGCGGCTGCT GCAGGGGGTT GCCAATGTGC GCGGTGCGTT GGTGCCGTGC CTGTCACTGG CTGACTTGCT GGGTGTGCAA GCCGGTACCG CCGAGCAGCG TGGTGGCCGG GCGATGCCAC GCATGCTGAT TCTGGCCGCC GAAGGTGGGC CGGTGGTGAT GGCCGTCGAG GAAATCGACG GTATTCACCG GCTCGACCCA CTGTTGCTTG GCAGCGGCCA GGACGCCACA CGCTTCACCT CCGCAGTCCT GCAGTGGCGC GGCCGCAGTG TGCGGGTGCT GGACGATCAA CACTTACTGT CTGCCGTGCA GCGGAGCTTG TCATGA
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Protein sequence | MNSESAMQLL AEDDAHIDDC WNRIGVHGDK QCPLLEQHVH CRNCEVYAAA ATRLLDRYAL MQDHQAAVAQ PVEENTGRSV LLFRLGEEWL ALATACLAEI APLQAVHSLP HQRSRLLQGV ANVRGALVPC LSLADLLGVQ AGTAEQRGGR AMPRMLILAA EGGPVVMAVE EIDGIHRLDP LLLGSGQDAT RFTSAVLQWR GRSVRVLDDQ HLLSAVQRSL S
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