Gene PputGB1_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1094 
Symbol 
ID5868853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1242614 
End bp1243120 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID641546193 
ProductCheW protein 
Protein accessionYP_001667338 
Protein GI167032107 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0267414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACT TGCAACCGCG CCCCGCGCGG GCGAAAAACG CCAAGGGGGC GTTGTACCTG 
CAGTTTCGCA TCAGGGCGCA GCGTTTTGCC CTGAGCGTGC ACGAGGTGAT CGAGGTGTTG
CCGCGTCAGC CGCTCAAGCC GATTGCCCAG GCACCTGCCT GGGTCGCCGG TATCCTCGCT
CATCGTGGCC AGCTGGTGCC GGTGATCGAC CTTGCCGCGC TGAGCTTTGG CCAGCCAGCG
GCGCAGCGCA CCAGCACCCG CCTGGTGTTG GTGCACTACC GTGGCAGCCT GCAGCTTGGT
TTGATTCTGG AGCAGGCCAC CGAAACCCTG CGTTGCCAAC CCGACGAGTT TCAGCCCTAT
GGGGTGGACA CCGGCGATGC GCCTTATCTG GGCCCGGTGC GCCAGGATGC CCAGGGCATG
CTGCAGCGCA TCGAAGTCAA TGACCTGCTG CCCGACGCTG TGCACGAATT GCTGTACACG
CAAGACCCGA CAGGGATGCC TACATGA
 
Protein sequence
MNDLQPRPAR AKNAKGALYL QFRIRAQRFA LSVHEVIEVL PRQPLKPIAQ APAWVAGILA 
HRGQLVPVID LAALSFGQPA AQRTSTRLVL VHYRGSLQLG LILEQATETL RCQPDEFQPY
GVDTGDAPYL GPVRQDAQGM LQRIEVNDLL PDAVHELLYT QDPTGMPT