| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1091 |
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| Symbol | |
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| ID | 5868850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1238777 |
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| End bp | 1239928 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546190 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001667335 |
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| Protein GI | 167032104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.754568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTGC ACAAGACCGC ATTGCTCGGC GCCATGACTG GCGCCGTGCT GGCCAGCGCC
AGCCTGCAGG CCGCCGAACC GCCCAAGGCC CTGGGGGCCG GCGAGGGGCG CCTGGACATC
GTCGCCTGGC CCGGCTACAT CGAGCGCGGT GAAAGCGACA AGGCCTACGA CTGGGTGACC
GGTTTCGAGA AGGAAACCGG CTGCAAGGTC AGCGTGAAAA CCGCCGCCAC CTCGGACGAA
ATGGTCAGCC TGATGACCAA GGGCGGCTAT GACCTGGTGA CCGCCTCGGG CGACGCCTCG
CTGCGGCTGA TCGTCGGCAA GCGCGTACAG CCGATCAACA CCGCCTTGAT CCCCAACTGG
AAAAACATCG ACCCACGCCT GCAGAACGGC GGCTGGTACG TGGTCGACAA GCAAGTGTAT
GGCACCCCGT ATCAATGGGG GCCGAACGTG CTGCTGTACA ACACCAATAC CTTCAAGCAG
GCGCCAACCA GCTGGAGCGT TGTGTTCCAG CCGCAGGACC TGCCTGACGG CAAACCGAAC
AAGGGGCGCG TGCAAGCCTA TGACGGGCCG ATCTACATCG CCGACGCCGC CCTGTACTTG
AAGTCGGCCA AGCCCGAACT GGGTATCAAG GACCCGTACG AACTGAACGA GGAGCAATAC
AAGGCCGTGC TGGAACTGCT GCGCCAGCAG CAACCGCTGA TCCACCGCTA CTGGCATGAC
GCCACGGTGC AGATGAGCGA CGTGAAGAAC GAAGGCGTGG TCGCCTCCAG TTCATGGGGC
TACATGGTCA ATGGCCTGAA GGCCGAGAAC CAGCCAGTGG CCTCGACCAT TCCCAAGGAG
GGTGCGACCG GCTGGGCCGA CACCACCATG CTGCACGCCG AGGCCAAGCA CCCCAACTGC
GCCTACAAGT GGATGGACTG GTCGCTGCAG CCGAAGGTGC AGGGCGACGT GGCGGCCTGG
TTCGGCTCGT TGCCGGCGGT GCCGGCTGCC TGTACAGGCA GCCAATTGCT GGGCGCCGAG
GGCTGCAAGA CCAATGGCTT CGACAATTTC GACAAGATTG CCTTCTGGAA AACCCCGCAG
GCCCAGGGCG GCAAGTTCGT GCCGTATAGC CGCTGGACCC AGGACTACAT TGCAATCATG
GGTGGGCGCT GA
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| Protein sequence | MSVHKTALLG AMTGAVLASA SLQAAEPPKA LGAGEGRLDI VAWPGYIERG ESDKAYDWVT
GFEKETGCKV SVKTAATSDE MVSLMTKGGY DLVTASGDAS LRLIVGKRVQ PINTALIPNW
KNIDPRLQNG GWYVVDKQVY GTPYQWGPNV LLYNTNTFKQ APTSWSVVFQ PQDLPDGKPN
KGRVQAYDGP IYIADAALYL KSAKPELGIK DPYELNEEQY KAVLELLRQQ QPLIHRYWHD
ATVQMSDVKN EGVVASSSWG YMVNGLKAEN QPVASTIPKE GATGWADTTM LHAEAKHPNC
AYKWMDWSLQ PKVQGDVAAW FGSLPAVPAA CTGSQLLGAE GCKTNGFDNF DKIAFWKTPQ
AQGGKFVPYS RWTQDYIAIM GGR
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