Gene PputGB1_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1013 
Symbol 
ID5868773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1155064 
End bp1156350 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID641546114 
Productextracellular solute-binding protein 
Protein accessionYP_001667259 
Protein GI167032028 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA CGCTCCGTCT CGCTGCCGCA ATCTCCCTGG CTTCCTTACT CCCGCTCAGT 
GCCCAGGCTG CCGAACCCAA AGGCAGTGTC GAGGTGGTGC ACTGGTGGAC CTCCGGTGGT
GAAAAGGCGG CCGTCGATGT GCTCAAGGCC CAGGTCGAGA AAGACGGCTT CACGTGGAAG
GATGGCGCTG TCGCCGGCGG TGGCGGCGCC ACGGCCATGA CCGTGCTCAA GAGCCGCGCC
GTAGCGGGCA ACCCGCCGGG TGTCGCACAA ATCAAAGGGC CAGATATCCA GGACTGGGCG
GCCACCGGTT TGCTCGACGG CGAAGTGCTC AAGGATGTGG CCAAGCAAGA GCAGTGGGAC
ACCTTGCTCG ACAAGAAGGT CGCTGACAAC GTGAAGTATG ACGGTGACTA TGTTGCCGTA
CCGGTAAACA TCCACCGTAC CAACTGGCTC TGGATCAACC CAGAAGTCTT CAAGAAGGCC
GGCATCGACA AGGCGCCGGC CACGCTCGAT GAATTCTATG CCGCTGCCGA CAAGCTCAAG
GCCGCTGGCT TCATCCCGCT CGCCCATGGC GGCCAACCGT GGCAGGACAG CACCGTGTTT
GAAAGCGTGG TGCTCTCGGT GATGGGCGCG CAGGGTTACA AAAAGGCCAT GGTCGACCTC
GACAATGCGG CCCTGACCGG CCCGGACATG GTCAAGGCGC TGGCCGAGCT GAAAAAGGTC
GCCAACTACA TGGACCCGGA TGGCAAAGGC CAGGACTGGA ACCTGGAGGC GGCCAAGGTC
ATCAACGGCA AGGCCGGCAT GCAGATCATG GGCGACTGGG CCAAGAGCGA ATGGACCTTG
GCGAAGAAGA CCGCCGGCAA GGACTACCAG TGCGTGCCGT TCCCGGGTAC CGACAAGGCC
TTCCTCTACA ACATCGATTC GCTGGTGGTG TTCAAGCAGA ACAACGCAGG CACTTCTGCC
GGCCAGCAGG ACATTGCCCG CAAGGTGATG GGTGAGGACT TCCAGAAAGT CTTCAGCACC
AACAAAGGGT CGATCCCGGT GCGCAACGAC ATGCTGGCCG ACATGGCCAA GTATGGCTTC
GATGCTTGCG CGCAGCGCTC TGCCAGTGAC TTCCTGGCCG ATGCCAAGAA TGGCGGCCTG
CAGCCGAGCA TGGCGCACAA CATGGCCACC ACGCTGGCCG TGCAGGGTGC GTTCTTCGAT
GTAGTGACCA ACTACATCAA CGATCCCAAG GCCGATCCGG CCGATGCGGC GAAGAAGCTG
GCGGCGGCGA TCAAGGCTGC CCGGTAA
 
Protein sequence
MNSTLRLAAA ISLASLLPLS AQAAEPKGSV EVVHWWTSGG EKAAVDVLKA QVEKDGFTWK 
DGAVAGGGGA TAMTVLKSRA VAGNPPGVAQ IKGPDIQDWA ATGLLDGEVL KDVAKQEQWD
TLLDKKVADN VKYDGDYVAV PVNIHRTNWL WINPEVFKKA GIDKAPATLD EFYAAADKLK
AAGFIPLAHG GQPWQDSTVF ESVVLSVMGA QGYKKAMVDL DNAALTGPDM VKALAELKKV
ANYMDPDGKG QDWNLEAAKV INGKAGMQIM GDWAKSEWTL AKKTAGKDYQ CVPFPGTDKA
FLYNIDSLVV FKQNNAGTSA GQQDIARKVM GEDFQKVFST NKGSIPVRND MLADMAKYGF
DACAQRSASD FLADAKNGGL QPSMAHNMAT TLAVQGAFFD VVTNYINDPK ADPADAAKKL
AAAIKAAR