Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0968 |
Symbol | |
ID | 5868728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1104687 |
End bp | 1105334 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641546069 |
Product | toluene tolerance family protein |
Protein accession | YP_001667214 |
Protein GI | 167031983 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCGA TCCTGCGACG TGGCTTGCTG GTCCTGCTGG CGGCCTTCCC CTTGCTGACC ATGGCTGCGC AGACACCGCA CGATGTGGTC CAGGGCACCA CCAATGAACT GCTCGGCGAC CTCAAGGCCA ACAAGGAGCA GTACAAGTCC AACCCCAACG CCTTCTATGA ATCGCTGAAC CGCATTCTTG GGCCGGTGGT GGACGCAGAC GGTATTTCCC GCAGCATCAT GACCGTCAAG TACTCGCGCA AGGCTACCCC GGAGCAGATG CAGCGCTTCC AGGAAAACTT CAAGCGCAGC CTGATGCAGT TCTATGGCAA TGCCCTGCTC GAATACAACA ACCAGGGTAT CGTTGTCGAT CCGGCCAAGG CCGATGACGG CAAGCGCGCC AGTGTCGGCA TGAAGGTGAC CGGCAACAAC GGTGCCGTGT ACCCGGTGCA GTACACCCTG GAAAACATCG GCGGTGAGTG GAAGGTGCGT AACGTGATCG TCAATGGCAT CAATATTGGC AAACTGTTCC GCGATCAGTT CGCCGATGCC ATGCAGCGCA ACGGCAACGA CCTGGACAAG ACCATCGATG GCTGGGCCGG CGAAGTGGCC AAGGCCAAGC AGGCGGCCGA CAACTCGCCA GAGAAGACCG TCCAATGA
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Protein sequence | MISILRRGLL VLLAAFPLLT MAAQTPHDVV QGTTNELLGD LKANKEQYKS NPNAFYESLN RILGPVVDAD GISRSIMTVK YSRKATPEQM QRFQENFKRS LMQFYGNALL EYNNQGIVVD PAKADDGKRA SVGMKVTGNN GAVYPVQYTL ENIGGEWKVR NVIVNGINIG KLFRDQFADA MQRNGNDLDK TIDGWAGEVA KAKQAADNSP EKTVQ
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