Gene PputGB1_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0962 
Symbol 
ID5868722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1100245 
End bp1100817 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content58% 
IMG OID641546063 
Producthypothetical protein 
Protein accessionYP_001667208 
Protein GI167031977 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCA AGAAAGCCCG AAACATTGTG CTGCTTGGGG CGATCGCCGC CCTGCTGGTA 
GCCATTGGCT ACTGGAATGT CAGCCCGGAA AGCTTCCTCG ACAAGCCGGT GGCCCAAGTC
GACGAAAGCG CCATCGACTA TTACGCGATC AACGCCCACA GCGTGCAGTT CCTGCCCGAC
GGCAAGCTGC AGTACGAAAT GACCGCCGAC AAGGTCGAGC ACCTCAAGGC CAGCGAAATT
ACCCTGCTGA CCACGCCGGA CCTGCACATG TACCGCGGCA CCGAATACCC GTGGCACGTA
CAAAGCACCC GCGCCGAGGT CAACCCGGAC GGTACCGAGG TCGAGCTGAT CGACAAGGTA
CGGGTTGCCC GCACCGACGA AAAGCAGCGT GAAACCATCA TTACCAGCTC ACGCATGACC
GTGTTCCCGC AGAAGCAATA TGCGCAGACC GAGCAAGCCG TTAGAATCGA CGGCGCCGGT
GGCACAACTA CGGGCAAAGG AATGAAAGCG TATTTGAAAG AAGGCAAGAT GGACTTGCTC
TCTAACGTAA GAGGACAGTA TGAGGCTCGT TAA
 
Protein sequence
MFSKKARNIV LLGAIAALLV AIGYWNVSPE SFLDKPVAQV DESAIDYYAI NAHSVQFLPD 
GKLQYEMTAD KVEHLKASEI TLLTTPDLHM YRGTEYPWHV QSTRAEVNPD GTEVELIDKV
RVARTDEKQR ETIITSSRMT VFPQKQYAQT EQAVRIDGAG GTTTGKGMKA YLKEGKMDLL
SNVRGQYEAR