Gene PputGB1_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0929 
Symbol 
ID5868689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1067508 
End bp1068224 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content63% 
IMG OID641546030 
Producthypothetical protein 
Protein accessionYP_001667175 
Protein GI167031944 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCC CACGTCGCGG CACCGCCTTC ATCCTGTCTT GCGGCCTGCT CGCCAGCCTG 
CCGGCGCTGG CGGCCGATGA ACCGCGTTTC AACCAGGTAT CGCTGCGTGC CGAAGTCAGC
AAGGAAGTGG CGCGCGACCT GATGGTCGTG ACCTTGTACA GCGAAGCGCA GAACAGCGAC
CCGGGCAAGC TCGCCAAGCA GATCACCGAA ACCATGAACA AGGCCGTGCA GCAGTCGCGT
CAGGTCAAGG ACGTGAAGAT CAGCCAGGGA AGCCGCAACA GCTACCCGGT ATATGACAGC
AAGGGCCAGA AGATCACCGG CTGGCGCGAG CGCGCCGAAC TGCGCCTGGA AAGCGCCAAC
TTCCCGGCCT TGTCCCAGCT GACCGCCGAC CTGCTGCAAG AGCTGAAAAT GGGCGGCATG
GACTTCTCCA TCGCCCCGGC CACGCGCAAG GCCAGCGAAG ATGCACTGCT CAAGGATGCG
GTCGATGCCT TCAAGGCACG CGCGCAGCTG GCCACAGAAG CGCTGGGCGG CAAGGGCTAC
AAAGTGGTCA ACCTGAACCT CAACAGCAGC GGCTACCCAC GCCCGTACCT GCGTAGCGCA
CCGATGGCGA TGAAGGCCAT GGGGGCTGAT GAAGCGGCAC CAGCGCCGGA TATCGAAGCA
GGCACCAGTG AAGTGAGCAT GAATGCCGAT GGCCTGATCG AAGTGCAGAT GCCTTAA
 
Protein sequence
MQIPRRGTAF ILSCGLLASL PALAADEPRF NQVSLRAEVS KEVARDLMVV TLYSEAQNSD 
PGKLAKQITE TMNKAVQQSR QVKDVKISQG SRNSYPVYDS KGQKITGWRE RAELRLESAN
FPALSQLTAD LLQELKMGGM DFSIAPATRK ASEDALLKDA VDAFKARAQL ATEALGGKGY
KVVNLNLNSS GYPRPYLRSA PMAMKAMGAD EAAPAPDIEA GTSEVSMNAD GLIEVQMP