Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0929 |
Symbol | |
ID | 5868689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1067508 |
End bp | 1068224 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546030 |
Product | hypothetical protein |
Protein accession | YP_001667175 |
Protein GI | 167031944 |
COG category | [S] Function unknown |
COG ID | [COG3471] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCC CACGTCGCGG CACCGCCTTC ATCCTGTCTT GCGGCCTGCT CGCCAGCCTG CCGGCGCTGG CGGCCGATGA ACCGCGTTTC AACCAGGTAT CGCTGCGTGC CGAAGTCAGC AAGGAAGTGG CGCGCGACCT GATGGTCGTG ACCTTGTACA GCGAAGCGCA GAACAGCGAC CCGGGCAAGC TCGCCAAGCA GATCACCGAA ACCATGAACA AGGCCGTGCA GCAGTCGCGT CAGGTCAAGG ACGTGAAGAT CAGCCAGGGA AGCCGCAACA GCTACCCGGT ATATGACAGC AAGGGCCAGA AGATCACCGG CTGGCGCGAG CGCGCCGAAC TGCGCCTGGA AAGCGCCAAC TTCCCGGCCT TGTCCCAGCT GACCGCCGAC CTGCTGCAAG AGCTGAAAAT GGGCGGCATG GACTTCTCCA TCGCCCCGGC CACGCGCAAG GCCAGCGAAG ATGCACTGCT CAAGGATGCG GTCGATGCCT TCAAGGCACG CGCGCAGCTG GCCACAGAAG CGCTGGGCGG CAAGGGCTAC AAAGTGGTCA ACCTGAACCT CAACAGCAGC GGCTACCCAC GCCCGTACCT GCGTAGCGCA CCGATGGCGA TGAAGGCCAT GGGGGCTGAT GAAGCGGCAC CAGCGCCGGA TATCGAAGCA GGCACCAGTG AAGTGAGCAT GAATGCCGAT GGCCTGATCG AAGTGCAGAT GCCTTAA
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Protein sequence | MQIPRRGTAF ILSCGLLASL PALAADEPRF NQVSLRAEVS KEVARDLMVV TLYSEAQNSD PGKLAKQITE TMNKAVQQSR QVKDVKISQG SRNSYPVYDS KGQKITGWRE RAELRLESAN FPALSQLTAD LLQELKMGGM DFSIAPATRK ASEDALLKDA VDAFKARAQL ATEALGGKGY KVVNLNLNSS GYPRPYLRSA PMAMKAMGAD EAAPAPDIEA GTSEVSMNAD GLIEVQMP
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