| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0879 |
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| Symbol | secF |
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| ID | 5868639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1012400 |
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| End bp | 1013308 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545980 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001667125 |
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| Protein GI | 167031894 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0954141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCA TCAATTTCAT GGGCGTACGC AATGTCGCGT TCGCCATTAC CGTGCTCCTC
ACCGTGCTGG CGCTGTTCAG CTGGTGGCAG AAAGGCCTGA ACTTCGGCCT GGACTTCACC
GGTGGTACGC TGATCGAGCT GACCTACGAG CGCCCGGCCG ACCTCAAGGC GGTGCGGGCC
GAGCTGGTCG ATTCGGGCTT CCACGAGGCG GTGGTGCAGA GCTTTGGCGC TACCACCGAC
CTGCTGGTGC GTATGCCGGG CGATGACCCA CAGCTGGGCA ACAAGGTAGC TGCCGCGCTG
CAGAAGGCTG GCGGCGACAA CCCGGCAACC CTCAAGCGTG TCGAGTTCGT CGGCCCGCAG
GTGGGTGAAG AGCTGCGCGA CCAGGGTGGC ATGGGCATGC TCCTGGCCCT GGGCGGCATC
CTTATCTACC TGGCCTTCCG CTTCCAGTGG AAGTTCGCCG TGGGTGCGAT CATCTCGCTG
ATCCATGACG TGGTGGTGAC CCTGGGTATC CTGTCGTTCT TCCAGATCAC CTTCGACCTG
ACGGTGCTGG CAGCGGTGCT GGCGATCATC GGCTACTCGT TGAACGACAC CATCGTCGTG
TTCGACCGTG TGCGTGAGAA CTTCCGCGTC ATGCGCAAGG CCTCGCTGAT CGAGAACATC
AACGTTTCCA CCACCCAGAC CCTGCTGCGT ACCATCGCTA CCTCGGTTTC GACCTTGTTG
GCCATTGCCG CGCTGCTGTT CTTTGGTGGT GACAACCTGT TCGGCTTCTC GCTGGCCTTG
TTCATCGGCG TCATGGCCGG TACCTACTCG TCGATCTACA TCGCCAACGT GGTACTGATC
TGGCTGAACC TGAACAGCGA AGACCTCATC CCGCCGACCA AGGCAGAGGG CGTGGACGAG
CGTCCATAA
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| Protein sequence | MKTINFMGVR NVAFAITVLL TVLALFSWWQ KGLNFGLDFT GGTLIELTYE RPADLKAVRA
ELVDSGFHEA VVQSFGATTD LLVRMPGDDP QLGNKVAAAL QKAGGDNPAT LKRVEFVGPQ
VGEELRDQGG MGMLLALGGI LIYLAFRFQW KFAVGAIISL IHDVVVTLGI LSFFQITFDL
TVLAAVLAII GYSLNDTIVV FDRVRENFRV MRKASLIENI NVSTTQTLLR TIATSVSTLL
AIAALLFFGG DNLFGFSLAL FIGVMAGTYS SIYIANVVLI WLNLNSEDLI PPTKAEGVDE
RP
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