Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0867 |
Symbol | |
ID | 5868626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 999426 |
End bp | 1000253 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545967 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001667113 |
Protein GI | 167031882 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGGG CCGACGCCCG CGACCCGGCA TCGTTGCCAC GGTTGCTGCT GGCCTTGCTG GCCGTGGCGG TGCTATGGCC GGGTATCCAG TTGAGCGAAC TGAACCCTTG GGTGCTGTTG CAGGCGGACA ACCGTCAGCA GATCGCCAGT TTCACTAGCG CCTTCTGGCC GCCGGCACAT GATGCTGATT TTATCGCGCT GTTGTATGAA GCCACGCTGC AGACCCTGGC CGTGGCCACC GCTGGCATGG CGTTGGCGTT GCTGCTTGCA GTCCCGACAG GGCTGCTGGC CAGCCGCGCC TTGTCGTTGC GCGCCGCCTC TCGTGGAGGT CGCGCTGGGT TGTGGTCGCG GCTGCTGCGC CTGCCGGTGC GCGGGTTGTT GATTTTCCTG CGTAGCGTGC CGGAAATTGT CTGGGCGCTG TTGTTCGTAC GGGCCGTGGG GCTGGGGCCG ACGGCGGGTG TTCTGGCGAT CGCCATCACC TATAGCGGCA TGCTCGGCAA GGTTTACGCC GAGATTTTTG AATCGGTGGA CCAGCGTCCG GCCCACGCGT TGTTGCAGGC GGGCAGTGGC CGGCTGGCGG CGTTTCTATA CGGCATCCTG CCCAATGCCG CTTCCGAAGT TGTGTCGTAC ACCGTGTACC GCTGGGAATG CGCGGTGCGG GCTTCGGTGG TGATGGGCTT TGTCGGCGCT GGCGGCCTGG GGCAGCAGAT CGACCTGTCG ATGCGCATGT TCGCGGGTGC GGAGGTAGCC AGCATGCTGC TGACGTTCCT GCTGTTGGTG ATTCTGGCCG ACCTGCTGAG CCGCCTGTTG CGCTGGAGGC TGGCATGA
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Protein sequence | MLRADARDPA SLPRLLLALL AVAVLWPGIQ LSELNPWVLL QADNRQQIAS FTSAFWPPAH DADFIALLYE ATLQTLAVAT AGMALALLLA VPTGLLASRA LSLRAASRGG RAGLWSRLLR LPVRGLLIFL RSVPEIVWAL LFVRAVGLGP TAGVLAIAIT YSGMLGKVYA EIFESVDQRP AHALLQAGSG RLAAFLYGIL PNAASEVVSY TVYRWECAVR ASVVMGFVGA GGLGQQIDLS MRMFAGAEVA SMLLTFLLLV ILADLLSRLL RWRLA
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