| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0720 |
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| Symbol | rplU |
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| ID | 5868477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 821825 |
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| End bp | 822139 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641545818 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001666966 |
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| Protein GI | 167031735 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.7553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.901329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTACG CAGTAATCGT TACCGGCGGC AAGCAGTACA AAGTCGCTGA AGGTGAATTC
CTCAAGATCG AAAAACTGGA AGTCGCCACT GGCGAATCCG TGACCTTCGA TCGCGTTCTG
CTGGTCGCCA ACGGTGAAGA AGTCACCATC GGTGCTCCAG TTGTTGCTGG CGCTAAAGTA
GTGGCCGAAG TCGTTTCGCA AGGCCGCCAC GACAAGGTTC GCATCATCAA GTTCCGTCGT
CGTAAGCACC ACATGAAGCG TATGGGCCAC CGCCAGTGGT TCACCGAGAT CAAAATCACC
GGCATCCAGG CTTAA
|
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| Protein sequence | MSYAVIVTGG KQYKVAEGEF LKIEKLEVAT GESVTFDRVL LVANGEEVTI GAPVVAGAKV
VAEVVSQGRH DKVRIIKFRR RKHHMKRMGH RQWFTEIKIT GIQA
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