Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0686 |
Symbol | |
ID | 5868443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 778305 |
End bp | 779192 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641545784 |
Product | phage integrase family protein |
Protein accession | YP_001666932 |
Protein GI | 167031701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGAAAA GTCTCCAGGG CACTCACATC CGCTCGGTCG GCACCGTTCG CAATTATGAG CAACGCTTGG TGCGTATTAC CGCTTATCTT CAGGAGCATC GACTCGGCAG CCTCCGTGAA ATGACCCCCG CCCGTGCCCT TGAGTACCTC CGCCAAAGGG CGACCGTCGT TGGCCAGAAA ACCTTGGATA TGGAGCGCCA GGCTCTTCAA GCCATGATGC AGCATGTCAC TCACCAGCTA ACACCGGGCC AGACCCTTGA AGTCATCAAG AGCACGGCAA TAGGCCGTAC AGGAACGACA AACCATCCTG CCTTGGGCCG TAGGCTGGCC GATCAAACGA GAGCCTACAA CGGCGAGCAA ATGTCATTGA TTGCAGCTCG TCAAGCTCCC CACAACGCCC TGGCGACAGA GATTGCGTAT GCCGCAGGCC TCCGTGCCCA TGAGTTACTC GGCCTTCGCA GAACGCACCA ACGTGTACCG GATCAACGTC CTGCGCATGG AATGAAGTTT TCAGGCATTC GCGAATCGAC CATCAGCTAC ACCGTTCACG GCAAAGGTGG GCTGATCCGC GAAGTCCGTA TTCCAATACC CCTGGCCCAG CGACTGGAGA GAACCCGGCT GACAGAGCCG CGAACTGTCA AAGATCGAGG AATCAACTAC CAACAGTTTT ACGAGATTGG CGGTGGTCAG CCGTGGAGCA AAAGCGTTAG CGCAGCTTCC AAAGTCGCAC TCGGGTGGTC GAACGGCGCA CATGGCCTGC GGCATACCTA CGCACAGGAG CGCATGACGA CATTGCAAAG TCATTTAACG CGAAAACAGG CACTGGCGGT GGTTTCGCAG GAAATGGGCC ATTTCCGGCC GGAAATTACT GAGGTTTATC TGCGTTGA
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Protein sequence | MMKSLQGTHI RSVGTVRNYE QRLVRITAYL QEHRLGSLRE MTPARALEYL RQRATVVGQK TLDMERQALQ AMMQHVTHQL TPGQTLEVIK STAIGRTGTT NHPALGRRLA DQTRAYNGEQ MSLIAARQAP HNALATEIAY AAGLRAHELL GLRRTHQRVP DQRPAHGMKF SGIRESTISY TVHGKGGLIR EVRIPIPLAQ RLERTRLTEP RTVKDRGINY QQFYEIGGGQ PWSKSVSAAS KVALGWSNGA HGLRHTYAQE RMTTLQSHLT RKQALAVVSQ EMGHFRPEIT EVYLR
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