Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0684 |
Symbol | |
ID | 5868441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 776862 |
End bp | 777506 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641545782 |
Product | hypothetical protein |
Protein accession | YP_001666930 |
Protein GI | 167031699 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.910515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTATA CTGGTGCGAT ACTTGATCAG GGAGACTTGA ATGTTTGGGG GGCAGTCTTG CACCAGGCGC AAGAGCAGGA GTTGGGCTCG GAGTGTAAGG TCACAGCTTA CCGGCTTTTA AAGTTGCTAG GCAAAACAGA CTCGGGGAAA AACAGAAAAG ACCTAGAAGC ATGTATTAGT AGGCTTAAGG CTACCGCCTT GCAGATTGAA GTGGGTGGAT ATTCATATGA AGGAAGTTTG ATTCATGAGG TCTATCGGGG GCAGAGCGAG CGGAGTAAGC GTTTGTACGT CATTCGCTTG AATTCCAAGC TTCATGTGCT TTTCAATGGA AAACAGTATA CCAATGTGAA TTGGTCTGTA CGCCAAGCGC TGCATGGAAA GCCGCTAGCT CAATGGTTGC ATGGGTTTTA CTCATCGCAT GCAAAACCTT ATGATTATAA GGTTGAGACC TTGCATCAAT TATGTAGGAG TCGTGCAAAG TCATTGTCTG ATTTCAAAAA AGACTTACGC CGTTCGCTTG AATGTGTAGT GAGTGCTAGT GCTGCAGAAG GGCAGCCGCT TAGTTATATT TTTAAAGGAA ATCTCGTACA AGTTAACACC ACACCAAGCG CTTCTCAGCA GCGCCATTTG GCCAAAAAGC GCTAA
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Protein sequence | MVYTGAILDQ GDLNVWGAVL HQAQEQELGS ECKVTAYRLL KLLGKTDSGK NRKDLEACIS RLKATALQIE VGGYSYEGSL IHEVYRGQSE RSKRLYVIRL NSKLHVLFNG KQYTNVNWSV RQALHGKPLA QWLHGFYSSH AKPYDYKVET LHQLCRSRAK SLSDFKKDLR RSLECVVSAS AAEGQPLSYI FKGNLVQVNT TPSASQQRHL AKKR
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