| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0622 |
|---|
| Symbol | |
|---|
| ID | 5868368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 708932 |
|---|
| End bp | 709567 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641545710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001666869 |
|---|
| Protein GI | 167031638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0113849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTACC GTCTGTTGTG CCTGGCCCTG CTGCCCATTG CCCTGGCTGG CTGCCAGGGC
AGCAACCCGT ATGTGGCCAG CAGCCGCCCG TTACCACCAG CCCCTGCACA GGCCGCTACC
ACTTTCGACG CCAGTGCCTA CCCGGCGCCC GCCCGTGATT ACGGGCACTA CCGCAGCTGG
AGCTGGCGCA ACGGCCAGTT ACCCAGCGGC TCGGCCAATG CTGACCCGGC GCAGTTGGCC
GATGCCGTCA GCGGCGCACT CGATCAGCAT GGCCTGCGCC CCGCCCGAGG GGCCTCCGGC
GACTTGTTGG TCAGCGCCGA CATGCGCCTG GAAAAACGCT TGCGCCAGGT GCGTGACTAC
GACACCTACG ACCCCTACTA CGGGCCGTAC CCCTACGGTG GTGTCGGCTA TGGTGGCTAC
CGCCATGGTT ACGGGGGCTA TGCCAGTGTG CCCATCGTGC GCACCTATGA GGTCGAAGTC
ATGGTGGTGC GTATCGACCT GTACGACGCC CGCAGCGGCC AGCCGGTATG GAGCGCCAGC
GCCGAAAGCG GCAGCGACAA GGACTCGCCG CGCGAACGCG AAAGTGCCTT GCGCGATTCT
GTGCACAAGG CGCTCAGCGG CTATCCTCCC AGTTAA
|
|---|
| Protein sequence | MPYRLLCLAL LPIALAGCQG SNPYVASSRP LPPAPAQAAT TFDASAYPAP ARDYGHYRSW
SWRNGQLPSG SANADPAQLA DAVSGALDQH GLRPARGASG DLLVSADMRL EKRLRQVRDY
DTYDPYYGPY PYGGVGYGGY RHGYGGYASV PIVRTYEVEV MVVRIDLYDA RSGQPVWSAS
AESGSDKDSP RERESALRDS VHKALSGYPP S
|
|---|
| |