| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0599 |
|---|
| Symbol | |
|---|
| ID | 5868345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 676821 |
|---|
| End bp | 677843 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641545687 |
|---|
| Product | transketolase central region |
|---|
| Protein accession | YP_001666846 |
|---|
| Protein GI | 167031615 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.315571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.029192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA AGATCAGCTA CCAGCAGGCC ATCAACGAAG CCCTGGCCCA GGAAATGCGC
CGTGACAATA CCGTGTTCAT CATCGGCGAA GACGTCGCCG GTGGTGCCGG TGCACCCGGC
GAGGATGACG CCTGGGGTGG CGTGCTGGGG GTGACCAAAG GCCTGTACCA CCAATTCCCC
GGCCGCGTGC TCGACGCGCC GCTGTCGGAA ATCGGCTATG TCGGCGCCGC GGTCGGTGCC
GCCACCCAGG GCCTGCGCCC GGTGTGCGAA CTGATGTTCG TCGACTTCGC CGGCTGCTGC
CTGGACCAGA TCCTCAACCA GGCCGCCAAG TTCCGCTACA TGTTCGGCGG CAAGGCGGTC
ACCCCGCTGG TGATGCGCAC GATGTACGGC GCCGGCCTGC GCGCGGCAGC CCAGCATTCG
CAGATGCTCA CCTCGCTATG GACGCACATC CCCGGCCTGA AGGTGGTGTG TCCGTCCTCG
CCCTACGATG CCAAGGGCCT GTTGATCCAG GCGATCCGTG ACAACGACCC GGTAATTTTC
TGCGAACACA AGCTGCTGTA CAGCATGCAA GGCGAAGTGC CAGAAGAGGT GTACACCGTG
CCGTTCGGCG AAGCCAACTT CCTGCGCGAT GGCGACGACG TGACCCTGGT GACCTATGGA
CGCATGGTCC ACGTGGCACT TGAAGCGGCC AACAATCTGG CCCGCCAGGG CATCGACTGC
GAGGTGCTGG ACTTGCGCAC CACCAGCCCG CTGGACGAAG ACAGCATTCT GGAAAGCGTG
GAGAAGACCG GCCGGCTGGT GGTGATCGAT GAAGCCAACC CGCGCTGTTC GATGGCCACC
GACATCAGCG CGCTGGTGGC GCAGAAGGCC TTCGGCGCAC TCAAGGGCCC GATCGAAATG
GTCACCGCGC CGCACACCCC GGTGCCGTTC TCCGACGCAC TGGAAGACCT GTACATCCCT
GACGCGGCGA AGATCGAAAC TGCCGTGCGC AAGGTGATCG AAGCTGCAAG GAGTGCCGCA
TGA
|
|---|
| Protein sequence | MARKISYQQA INEALAQEMR RDNTVFIIGE DVAGGAGAPG EDDAWGGVLG VTKGLYHQFP
GRVLDAPLSE IGYVGAAVGA ATQGLRPVCE LMFVDFAGCC LDQILNQAAK FRYMFGGKAV
TPLVMRTMYG AGLRAAAQHS QMLTSLWTHI PGLKVVCPSS PYDAKGLLIQ AIRDNDPVIF
CEHKLLYSMQ GEVPEEVYTV PFGEANFLRD GDDVTLVTYG RMVHVALEAA NNLARQGIDC
EVLDLRTTSP LDEDSILESV EKTGRLVVID EANPRCSMAT DISALVAQKA FGALKGPIEM
VTAPHTPVPF SDALEDLYIP DAAKIETAVR KVIEAARSAA
|
|---|
| |