| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0579 |
|---|
| Symbol | |
|---|
| ID | 5868325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 653286 |
|---|
| End bp | 653978 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641545667 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001666826 |
|---|
| Protein GI | 167031595 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCACCT CACTTCTCCT TGTCGAAGAC GACCCTCGCC TGCTTCAAGA CCTGGAACGC
CATTTCCTCA ACCGCGGTTT CCAGGTGCAC GCCTGCGCCA GCGGCACCCA GGCCCTGAAT
GCGATACAGC AATCGCAGTT CGATTTGGTG CTGTTGGACA TCATGCTGCC AGGCATCGAC
GGCCTCAGCC TGCTCGACGA GCTGCGCCGA CAACAGGCGG TACCGGTCAT GCTGATGTCG
GCGCTAGGCG CCGAGCAAGA TCGCATCAGC GGCTTTACCC GTGGCGCGGA CGATTACCTG
CCCAAGCCCT TCAGCCTGGC GGAGCTGGAT GCCCGGGTCG ACGCCTTGCT GCGGCGTGTG
GCATTCGACC GTGGCACGGC GCTGCGTACC GACGTCGGCG AGGTGATGCT GGACCACGAC
CGTCAAGACG TTATCCACAA CGGCAATGCC GCTGGCCTCA CCGCTTCCGA ATTCCGCTTG
CTGGTGACGC TGCGGGCGCA CCCCGGCGAA GCCTTGAGCA AACCCTTCCT GTACCAGAGC
GTGCTGCACC GGGCCTATAC CCGCCTGGAC AGGGGCCTGG ACGTGCATGT GTGCAACCTG
CGCCGCAAGC TGGCCGACAT CAGTGCCCAG CACCTGCAGA TCCAGGCCGT GCGTGGCCAA
GGGTATGTCC TGATCGACAC GGAACAGCCC TGA
|
|---|
| Protein sequence | MPTSLLLVED DPRLLQDLER HFLNRGFQVH ACASGTQALN AIQQSQFDLV LLDIMLPGID
GLSLLDELRR QQAVPVMLMS ALGAEQDRIS GFTRGADDYL PKPFSLAELD ARVDALLRRV
AFDRGTALRT DVGEVMLDHD RQDVIHNGNA AGLTASEFRL LVTLRAHPGE ALSKPFLYQS
VLHRAYTRLD RGLDVHVCNL RRKLADISAQ HLQIQAVRGQ GYVLIDTEQP
|
|---|
| |