| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0552 |
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| Symbol | |
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| ID | 5868298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 629233 |
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| End bp | 629943 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641545640 |
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| Product | ABC transporter related |
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| Protein accession | YP_001666799 |
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| Protein GI | 167031568 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.933539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CGTTGATCGA ACTGCGTGAC CTGGTGTTCG CCTGGCCAGG TCAGCCGCCG
CTGCTGGACA TTCCAGCCTT GCGCCTGAAC GCTGGTGAAG CCTTGTTCCT CAAGGGCCCC
AGCGGCAGTG GCAAGACCAC CTTGCTGGGC CTGCTGGGCG GGGTGAGCGT GCCCGCCCAG
GGCCGTATCG AGTTGCTCGG CCAGGACCTC GGCGGGCTGA GTCAGGGCGC CCGCGACCGT
TTTCGGGTGG ATCACACGGG GTACATCTTT CAGCAGTTCA ACCTGCTGCC ATTTCTGTCG
GTACGTGAAA ACGTCGAGCT GCCCTGCCGC TTCTCGCGCA GCCGCAAGGC CCGCGCCGAG
CAGCGCCATG GCGGTGTCGA CCAGGCAGCC AGCACGCTGT TGGCGCACCT GGGCCTGGAC
GACCCCGCCC TGCTCGCCCG CCGCGCCGAC AGCCTGTCGA TCGGCCAGCA GCAGCGGGTC
GCCGCCGCCC GCGCACTGAT CGGCCAGCCC GAGTTGGTGA TTGCCGACGA GCCGACTTCG
GCACTGGATA CCGACACCCG CGAAGCGTTC ATCCGCCTGC TGTTCGATGA GTGCCGCGCC
GCCGGCGCAA GCTTGTTGTT CGTCAGCCAC GATCAAAGCC TGGCACCGCT GTTCGACCGC
CACCTTTCCC TGGCCGACCT CAACCGCGCC GCCAAGCCCC GGGAGGCCTG A
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| Protein sequence | MSQPLIELRD LVFAWPGQPP LLDIPALRLN AGEALFLKGP SGSGKTTLLG LLGGVSVPAQ
GRIELLGQDL GGLSQGARDR FRVDHTGYIF QQFNLLPFLS VRENVELPCR FSRSRKARAE
QRHGGVDQAA STLLAHLGLD DPALLARRAD SLSIGQQQRV AAARALIGQP ELVIADEPTS
ALDTDTREAF IRLLFDECRA AGASLLFVSH DQSLAPLFDR HLSLADLNRA AKPREA
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