Gene PputGB1_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0547 
Symbol 
ID5868293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp624855 
End bp625298 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content61% 
IMG OID641545635 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001666794 
Protein GI167031563 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.660753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.959277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATG AACACAATGC GCAATGCCCC GTAGCCCGGG CCCTGGAGGT GCTGGGTGAC 
CGTTGGGCGC TGATGATCCT GCGCGATGCC TTTGACGGCC TGCACCGGTT CAGTGAATTT
CACAAGAACC TGGGGCTGGC GAAGAACATC CTCGCCTCGC GGCTCAAACT ACTGGTGGAG
AGCGAGTTGC TGGCCTTGCA GCCGGCATCG GATGGCAGTG CCTACAAGGA ATATGTGCTG
ACCGCGAAAG GGCGGTCGGT GTTTCCAGTG GTGGTTGGCT TGAGGCAATG GGGGGAGCGG
TTTCTGTTCG AGGCGGGTGA GGCGCGTTCG GAATTGGTGG AGGGAGCTAC CGGGCAGGCG
CTTGAGACGT TGCAGGTGCG TGCCCAGGAT GGGCGGGTTT TGCATGCCGA AGACTGCCTG
CGCAGAATGG TGCGGCATGA ATGA
 
Protein sequence
MLDEHNAQCP VARALEVLGD RWALMILRDA FDGLHRFSEF HKNLGLAKNI LASRLKLLVE 
SELLALQPAS DGSAYKEYVL TAKGRSVFPV VVGLRQWGER FLFEAGEARS ELVEGATGQA
LETLQVRAQD GRVLHAEDCL RRMVRHE