Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0547 |
Symbol | |
ID | 5868293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 624855 |
End bp | 625298 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545635 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001666794 |
Protein GI | 167031563 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.660753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.959277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATG AACACAATGC GCAATGCCCC GTAGCCCGGG CCCTGGAGGT GCTGGGTGAC CGTTGGGCGC TGATGATCCT GCGCGATGCC TTTGACGGCC TGCACCGGTT CAGTGAATTT CACAAGAACC TGGGGCTGGC GAAGAACATC CTCGCCTCGC GGCTCAAACT ACTGGTGGAG AGCGAGTTGC TGGCCTTGCA GCCGGCATCG GATGGCAGTG CCTACAAGGA ATATGTGCTG ACCGCGAAAG GGCGGTCGGT GTTTCCAGTG GTGGTTGGCT TGAGGCAATG GGGGGAGCGG TTTCTGTTCG AGGCGGGTGA GGCGCGTTCG GAATTGGTGG AGGGAGCTAC CGGGCAGGCG CTTGAGACGT TGCAGGTGCG TGCCCAGGAT GGGCGGGTTT TGCATGCCGA AGACTGCCTG CGCAGAATGG TGCGGCATGA ATGA
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Protein sequence | MLDEHNAQCP VARALEVLGD RWALMILRDA FDGLHRFSEF HKNLGLAKNI LASRLKLLVE SELLALQPAS DGSAYKEYVL TAKGRSVFPV VVGLRQWGER FLFEAGEARS ELVEGATGQA LETLQVRAQD GRVLHAEDCL RRMVRHE
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