Gene PputGB1_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0541 
Symbol 
ID5868287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp620057 
End bp620902 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content59% 
IMG OID641545629 
Producthypothetical protein 
Protein accessionYP_001666788 
Protein GI167031557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.664678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.956767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTGC AAACGGGATC TTCTCAGCGC CTGAAATGGC AGTTTGACGA ACCCGCCCCA 
GGCAAAGAAC TTTTCATCGA CGAAGTATTC GGAACCTACC AGCAACAGGC CCGATTGCTG
GTACCCGATA TCGAGCGCGC AGCGCCTGCA TTCGTCCTGG GTGGCGCGCG CTCCGACTTT
ACCCGGCTCA ACCCCCTGCT CTATCGCTTG CAAGCCGCAG GCATAGGTTC GCTCACTGCT
AATCTGTCAG GCCATAGCCT TGCCAGTGAA CCTGGTGCAG CTTCGCCTTC ACTGGCTACG
AACCTTGATG AGGCACGACG CTTCCACGCG CATATCGCAC CTCAATGCCG AACGATAATT
GGCCACAGCC TGGGCGCGGC AATTGCGCTG AAACTTGCAG CACAATTGCC GCAGGTGAAC
AGCATCGTGC TGGTCTGCCC AGCAGTCTAT CCAGACCATG CTCACCAGGC CCCCTTCGGT
CCGGCATTCA CAGCCGCCAT CAGAAAACCC TATGGCTTTC TCGATTGCGA CAGTTACGCC
TTCCTCAAGC AGTTCCAAGG CAGAGTGCTG ATGGTGATAG GCGAATATGA CGGGCTCAAC
TCACAGCGAT TCGGCAAAGG CCCAGGCACC AGCGCAGGCA GCCTGTGGCT GACCGGCGCC
GAGCGCTACA GCCCGATTCC TGAGGAGGTC ACCCAGGCCC TGATGCAATC AGTTGCAGCC
GCGCGTTTGC AATGCGTGTT TCTTACAGAC TGCGACCATG GCATCGCCGC CCATTTACGC
AGTACGCCAG CGATTGCGGA TCAGGTTGCG AGCGCCGTGG AAACCTTCAT CCTCGAAGAC
GCCTGA
 
Protein sequence
MHLQTGSSQR LKWQFDEPAP GKELFIDEVF GTYQQQARLL VPDIERAAPA FVLGGARSDF 
TRLNPLLYRL QAAGIGSLTA NLSGHSLASE PGAASPSLAT NLDEARRFHA HIAPQCRTII
GHSLGAAIAL KLAAQLPQVN SIVLVCPAVY PDHAHQAPFG PAFTAAIRKP YGFLDCDSYA
FLKQFQGRVL MVIGEYDGLN SQRFGKGPGT SAGSLWLTGA ERYSPIPEEV TQALMQSVAA
ARLQCVFLTD CDHGIAAHLR STPAIADQVA SAVETFILED A