| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0468 |
|---|
| Symbol | |
|---|
| ID | 5868210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 548757 |
|---|
| End bp | 549506 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641545552 |
|---|
| Product | pantothenate kinase |
|---|
| Protein accession | YP_001666715 |
|---|
| Protein GI | 167031484 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
|---|
| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.584887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTTG AGCTCGACTG CGGTAACAGC TTCATCAAGT GGCGGGTAAT TCATGCTGCT
GACGCAGTGA TTGAAGGTGG CGGGATCGTC GATTCCGATC AAGCGCTGCT GGCTGCAGTG
GCGGCGCTGG CTTCCGTGCG TCTAACGGGC TGTCGTATTG TCAGTGTGCG CAGCGAGGAA
GAAACCGATG CGCTTTGTGC GTTGATTGCC CAGGCTTTTG CCGTGCAGGC GCGCGTTGCG
CATCCGGCAC AGAGCATGGC CGGTGTGCGC AACGGTTATG ACGACTATCA GCGCCTGGGT
ATGGACCGTT GGCTGGCTGC GCTGGGTGCA TTTCACCTGG CCGGGGGCGC GTGCCTGGTA
ATCGACCTGG GGACTGCCGC CAAAGCGGAC TTTGTTGCTG CGGACGGCGA GCACCTGGGC
GGCTACATCT GCCCGGGGAT GCCCTTGATG CGCAGCCAGT TGCGTACTCA CACCCGGCGT
ATCCGCTATG ACGATGCTTC CGCTGAGCGT GCACTGACTA GCTTGTCACC GGGTCGCTCC
ACCGTCGAGG CGGTAGAGCG CGGTTGCGTG TTAATGCTTC AGGGCTTTGC CCGCACCCAG
CTCGAGCAGG CACGCGCGCT TTGGGGGGAG GCATTCACAG TGTTCCTTAC TGGCGGCGAT
GCACCGCTGG TGAGGGAGGC CGTACCGCAG GCGCGTGTCG TACCGGACCT GGTTTTCGTT
GGCCTGGCCA TGGCCTGCCC ATTGGATTGA
|
|---|
| Protein sequence | MILELDCGNS FIKWRVIHAA DAVIEGGGIV DSDQALLAAV AALASVRLTG CRIVSVRSEE
ETDALCALIA QAFAVQARVA HPAQSMAGVR NGYDDYQRLG MDRWLAALGA FHLAGGACLV
IDLGTAAKAD FVAADGEHLG GYICPGMPLM RSQLRTHTRR IRYDDASAER ALTSLSPGRS
TVEAVERGCV LMLQGFARTQ LEQARALWGE AFTVFLTGGD APLVREAVPQ ARVVPDLVFV
GLAMACPLD
|
|---|
| |