Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0406 |
Symbol | |
ID | 5868144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 474058 |
End bp | 474333 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641545486 |
Product | pyrroloquinoline quinone biosynthesis protein PqqD |
Protein accession | YP_001666653 |
Protein GI | 167031422 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTTG ATCGCAATCA AGTGCCGAAC TGGCGCCCCG GCTACCGCTT CCAGTACGAG CCGGCGCAAA AGGGCCATGT GTTGCTGTAC CCCGAGGGCA TGATCAAGCT CAACGAAAGC GCCAGCCTGA TCGGTGGCCT GATCGACGGC CAGCGTGACG TGGCAGCGAT CATCAGCGAA CTCGAACAGC AATTCCCCGA TGTCCCGGAA GTGGCCGATG ACATCGAGCA ATTCATGGAG GTGGCCCGTG CCGAACACTG GATCGTCCTC GCCTGA
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Protein sequence | MSLDRNQVPN WRPGYRFQYE PAQKGHVLLY PEGMIKLNES ASLIGGLIDG QRDVAAIISE LEQQFPDVPE VADDIEQFME VARAEHWIVL A
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