| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0404 |
|---|
| Symbol | |
|---|
| ID | 5868142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 471137 |
|---|
| End bp | 472960 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641545484 |
|---|
| Product | peptidase S9 prolyl oligopeptidase |
|---|
| Protein accession | YP_001666651 |
|---|
| Protein GI | 167031420 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.903188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAA CTCACGTGTC ATCGCCCGCG GCTGAATTCA GCGCGGCCCA GGCGGTGGCC
GCCGGCACCG ACTTCGCCGA ACTCAAAGTC AGTGCCGACG GGCTGTTCTG GATCGAATTT
CGCCCGGCCG ATGGTGCTTG CCGTATCTGG CACTGGCTGC ACTACCAGGC CCGCTGCCTG
ACGCCAGATG GTTTCAGCGT GCGCAGCCGG GCCTACGAGT ATGGCGGTGG CAGCTTCTGC
CTGGGTGGCG ACGGGTTGGT GTTCGTCAAC GAAAAGGACC AGCAGGTCTA CACCCAACCG
CTGGACGATT TGCTACCGCG TGCTCTGACC CGCGATGCCA GCTGCCGCTA TGGCGATGTG
CAGTGGCACG ACAGCCAGGT GCTGGCCGTC GAGGAGCGCC ATGCCGAGCA GGTGGAGCAT
CGCCTCGTCG CTTTGGGCGA AAGCCGCCGT GAGGTACTCG CCGAGGGTGC CGATTTCTAC
GCCGCACCCA CCGTGAGTGC CAATGGCCAA CGCCTGGCGT GGATCGAATG GGACCGCCCT
GCACAGCCCT GGACCGTGAC CCGCCTGATG AGCCGCACAC GGGATGCCAG CGGCCACTGG
GGGCCGCCGC AGTGTGTAGC CGCCGCTGAC GAATCGCTGC AACAACCACG CTTCGATGCC
GAAGGCCGGC TCTACTGCCT ATCCGACCGC AACGGCTTCT GGCAGCCCTG GGGAGAGGTC
GAGGGTCACT GGCAAGCCTT GCCCGCCAAG TCGGCGGACC ATGCAGCAGC GCCTTGGCAG
TTGGGCACCT GCACCTGGCT GCCACTGGGG CCGCAAAGCT ACCTGGCCAG CTGGTTCCAG
GATGGCTTCG GGCAATTGGG GCTGCGTGGC GAAGATGGCC GCATGGCGCG GTTTGCCAGT
GCTTATACTC GTTTTCGCAA CCTGGCCATG GATGCCGAAC ACCTCTATGC CATTGCCGCC
TCGCCTATCA GCCCGCCGGC AGTGATTGCC ATCGACCGCG GCAACCACGA GGTCCGTGTG
CTGGCCGGTG GTGCCGAGGT GCTACCGGCA GGGCGCATCA GCCTGCCGCA GCCCATCCAC
TATGGCAGTG ACGGCGAGCA GGCCCATGGC TTCTTCTACC CGCCAGTGCA GTCGCAAGGC
GCCGCACCGC TGGTGGTGTT CGTCCATGGT GGGCCGACTT CGGCCTGTTA CCCCGTGCTC
GACCCACGCA TCCAGTACTG GACCCAGCGC GGCTTTGCCG TGGCCGACCT GAACTACCGG
GGCAGCACCG GCTATGGCCG GGAGTACCGC CAGGCACTGC ACCTGCGCTG GGGCGAAAGC
GATGTGGCCG ATGCCTGCGC AGCGGTCGAA TACCTGGCGG CTCAGGGCTG GGTCGACAAA
CACAAGGCGT TCATCCGCGG CGGCAGCGCC GGTGGCTATA CCACCTTGTG CGCCCTGGCA
TTCCATGATG TGTTCCGTGC CGGCGCCAGC CTGTACGGGG TCAGCGACCC GGTGGCCCTG
GGCCGTGCCA CCCACAAGTT CGAGGGCGAC TACCTGGACT GGCTGATCGG CGACCCGCAG
CAGGACGCCG AGCGTTATCG CCAGCGCACG CCTTTGCTGC ATGCAGGGCA GATCAAGGTG
CCGGTGATTT TCTTCCAGGG CGAGCTGGAT GCGGTGGTGG TGCCGGAACA GACCCGCGCG
ATGCTGGCGG CGCTGCAGGC TAACGGGATC GAGGCTGAGG GGCACTTCTA TGCCGGAGAG
CGGCATGGGT TCCGCAAAGC GGAGAACCTG GCGCATGCAT TGGAAGAAGA GTGGAAATTC
TATTGCCGGG TGTTGAAGCA CTGA
|
|---|
| Protein sequence | MIETHVSSPA AEFSAAQAVA AGTDFAELKV SADGLFWIEF RPADGACRIW HWLHYQARCL
TPDGFSVRSR AYEYGGGSFC LGGDGLVFVN EKDQQVYTQP LDDLLPRALT RDASCRYGDV
QWHDSQVLAV EERHAEQVEH RLVALGESRR EVLAEGADFY AAPTVSANGQ RLAWIEWDRP
AQPWTVTRLM SRTRDASGHW GPPQCVAAAD ESLQQPRFDA EGRLYCLSDR NGFWQPWGEV
EGHWQALPAK SADHAAAPWQ LGTCTWLPLG PQSYLASWFQ DGFGQLGLRG EDGRMARFAS
AYTRFRNLAM DAEHLYAIAA SPISPPAVIA IDRGNHEVRV LAGGAEVLPA GRISLPQPIH
YGSDGEQAHG FFYPPVQSQG AAPLVVFVHG GPTSACYPVL DPRIQYWTQR GFAVADLNYR
GSTGYGREYR QALHLRWGES DVADACAAVE YLAAQGWVDK HKAFIRGGSA GGYTTLCALA
FHDVFRAGAS LYGVSDPVAL GRATHKFEGD YLDWLIGDPQ QDAERYRQRT PLLHAGQIKV
PVIFFQGELD AVVVPEQTRA MLAALQANGI EAEGHFYAGE RHGFRKAENL AHALEEEWKF
YCRVLKH
|
|---|
| |