| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0375 |
|---|
| Symbol | |
|---|
| ID | 5868113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 437120 |
|---|
| End bp | 438562 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641545455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001666622 |
|---|
| Protein GI | 167031391 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.578999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTGT CTGAATTGAA AGATGCCGGC CGCAACCCGT CGTTGCCGCT GAGCATCACC
CTGGCCGATG CCGCTGGCAG CGCTGACCTG CAACTGCTCA GCTTGCTGCG CGTGTTGCCA
GGCCAGCGTT ATGTGGGCGC TGGTGTGTGG CGCGGCACCC CGGTGCTGGC CAAGTTGCTG
GTAGGCGGCA ACGCGGCTAG GCATTTCCAG CGCGAGCTGC AAGGTGTGAA GTTGCTGGCC
GAGCAGGGCC TGACCACGCC CAAGCTGCTG GCCGACGGCC TCAAGGAAGG CGAAGGCGGC
TGGCTGCTGT TCGAATTCCT CGACGGTGCC GAAAGCCTGG CCGATGCCTG GGCCGCAGTT
GAAAACCTGC CCGTGCTGGC TGACGAACAG CACCTGGTGC TAGGCGAAGC GCTCACCGCC
GTTGCGCACA TGCACGCCCA AGGCCTGTGG CAGGAAGACT TGCACCTGGA CAACCTGCTG
CGCCATGGCG GCAAGTTGTA CTTGATCGAC GGCGCTGGCA TCAAGGCCGA AACACCTGGC
CAACAGTTGT CGCGTCCGCG TGTGCTGGAA AACCTCGGCG TGTTCTTCGC CCAATTGCCC
AAGCGCCTGG AGCCGTTCAT CGAAGAGCTG CTGGTGCACT ACCTGCTGGC CAATGCCGAG
CATGCGCTAC CGCTGGAAGC CCTGCAGAAA CAGGTAGACA AGGTGCGCAA CTGGCGGCAG
AAGGACTACC TGGAAAAGGC CGGCCGCGAG TGCAGCTTGT TCAGCGTCCA GCGCAGCCTC
TCGGGGTTGC AGGCGATCCG CCGCAGTGAA GTCAGCGCCA TGCAGCCGGT GCTGGCGCAG
GCCGATACGC TGATCGACAA GGGCCATCTG TACAAGACCG GTGGCGCCGC CAGTGTGGCA
CGCATCGAAG TGAACGGCCG TCAGCTGGTG CTCAAGCGCT ACAACATCAA GAACACCGCG
CATTGGTTCA AACGCTTTTG GCGCCCGAGC CGTGCCTGGC ATTCGTGGAT CGAGGGCCAT
CGTCTGGAAT TCCTCGACAT TGCCACACCC AAACCGTTGG CGGTGCTGGA GCAACGGGTC
ATGGGGCTGC GCAGCCGTGC TTACCTGGTG ACCGAGTACG TCGATGGCCC GGACCTCACC
GCGTGTTTCG CACCGTTCGT GGAGAACGGC GATGCACCGG AGGAACAGGT AGACGCCCTG
GTGCATGTGA TGCAGCAGCT GATCCGCGAA CGCATCAGCC ATGGCGACTT CAAGGGCCAT
AACCTGTTCT GGGACAACGG CCGGTGGTCG CTGATCGACC TCGACGCCAT GTGCCAGCAC
GCTACCCAGC TCAGCTTCGC CCCGGCCTAC GCCCGTGACC GGGCGCGGCT GCTGCGTAAC
TGGCCGAGCG GCAGTGCCTT GCATCAGCGG CTAGACCGGC TGCTGCCCAA GCTGGCCGAA
TGA
|
|---|
| Protein sequence | MRLSELKDAG RNPSLPLSIT LADAAGSADL QLLSLLRVLP GQRYVGAGVW RGTPVLAKLL
VGGNAARHFQ RELQGVKLLA EQGLTTPKLL ADGLKEGEGG WLLFEFLDGA ESLADAWAAV
ENLPVLADEQ HLVLGEALTA VAHMHAQGLW QEDLHLDNLL RHGGKLYLID GAGIKAETPG
QQLSRPRVLE NLGVFFAQLP KRLEPFIEEL LVHYLLANAE HALPLEALQK QVDKVRNWRQ
KDYLEKAGRE CSLFSVQRSL SGLQAIRRSE VSAMQPVLAQ ADTLIDKGHL YKTGGAASVA
RIEVNGRQLV LKRYNIKNTA HWFKRFWRPS RAWHSWIEGH RLEFLDIATP KPLAVLEQRV
MGLRSRAYLV TEYVDGPDLT ACFAPFVENG DAPEEQVDAL VHVMQQLIRE RISHGDFKGH
NLFWDNGRWS LIDLDAMCQH ATQLSFAPAY ARDRARLLRN WPSGSALHQR LDRLLPKLAE
|
|---|
| |