| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0204 |
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| Symbol | |
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| ID | 5867900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 240368 |
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| End bp | 241786 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545283 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001666453 |
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| Protein GI | 167031222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TGATCCTGGC TGGCCTGTGC CTGTCGTTGG GGGCCTGCAT GATGGTGGGG
CCCGACTATG AGGTGCCGAA GGATGCGGCG GTGCAACGCA GCGACCTGAA CGGCCCGCTG
CGCCAGGATG CCGACAGCGT GGTTTCGGCA CCGGTGCCCG AAGACTGGTG GCAGCTGTAT
CAGGACCAAC GGCTGAACGA GCTGGTGCGT CAGGCACTGA GTGCCAACAC CGAGCTGCGC
GTGGCCGCGG CCAACATCGC CAAGGCCCGG GCCCAAGTGG AGGTGGCCGA ATCGCAAGGC
GGCTTCAACG GTGGCGTCAA GCTTGGCGCC CAGCGCCTGC AGGAGTCGGG CGAAGCCTTC
CTGTTGCCGG AAAAAGTACC GGTGGCCAAC ATCGGTGAGG CCATCATCAG CGCCTCGTAC
CAGTTCGACT TGTGGGGCAC CTTCAAGCGC GGCACCGAAG CGGCCAAGGC CAACGCCGAC
GCAGTGCAGG CCGCTGCCGA TACTGCTCGT ATTACCTTGG TGGCAGACGT GGTCAAGGCC
TACACCCAGG TGTGCTCGGC CAACGAGGAG TACCACATTG CCCGCGAGTC GCTCGACTTG
CAGGAACAGA GCGTGACGCT CAACCAGCGC CTGCGTGATG CCGGGCGTGG TGATGAAACC
CAGGTCACCC GCTCGCAGAC TCAGTTCAAA TCCCTGCGCG CCGAACTGCC ACGTTTCAAA
GCCGAGCGCG AGACCGGCAT GTATACCCTG GCGGCTCTGT TGGCCAAACC CGTCGACCAG
CTGCCTGCAG GCACCGCCGA TTGTGCCGAA CTGCCGCACC TGAACCAGCT GGTTCCGGTA
GGCGATGGCG CCGCGTTGCT CAAGCGCCGC CCCGACGTGC GCCAGGCCGA GCGTCAGCTG
GCTGCTGCCA CGGCCTCCAT CGGCGTCGCC ACGGGCGCAC TGTACCCGGA CATCAGCATC
GGCGCTCAGG TGGGCACTAT CGGTATCCTG GAAAACCTCG GCGAGCCTGC AACCAACCGC
TGGGGCTTCG GCCCGCAGAT CAGCTGGAGT ATCCCCACCA ACGGTACCCG CGCGCGCATT
CGCATGGCCG AAGCTTCTAC CCAGGCAGCC TTGGCGAACT TCGATGGGGT GGTGCTCAAC
GCCATTCGCG AAACTCAGAC GCGCCTGGCG CAGTACAGCG CCTTACTGGA CCGGCGTGAT
GCGCTGGCCG AGGCGGAGAA ATCGGCCAAG GAAGCGGCGG ACCAGACGCA CCGCTATTAC
CAGGCAGGGC GTGAGTCGTT CCTGGCGGAT TTGCAGGCGA CGCGGGCTTA CACTGATATG
CGTGCTCAGC TGGCGGCGGC CAATAGCCAG GTGGCGATGG GGCAAATCGG GGTATTCCTG
GCGTTGGGCG GGGGCTGGAA GGACACCGCC AAGCACTGA
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| Protein sequence | MKQLILAGLC LSLGACMMVG PDYEVPKDAA VQRSDLNGPL RQDADSVVSA PVPEDWWQLY
QDQRLNELVR QALSANTELR VAAANIAKAR AQVEVAESQG GFNGGVKLGA QRLQESGEAF
LLPEKVPVAN IGEAIISASY QFDLWGTFKR GTEAAKANAD AVQAAADTAR ITLVADVVKA
YTQVCSANEE YHIARESLDL QEQSVTLNQR LRDAGRGDET QVTRSQTQFK SLRAELPRFK
AERETGMYTL AALLAKPVDQ LPAGTADCAE LPHLNQLVPV GDGAALLKRR PDVRQAERQL
AAATASIGVA TGALYPDISI GAQVGTIGIL ENLGEPATNR WGFGPQISWS IPTNGTRARI
RMAEASTQAA LANFDGVVLN AIRETQTRLA QYSALLDRRD ALAEAEKSAK EAADQTHRYY
QAGRESFLAD LQATRAYTDM RAQLAAANSQ VAMGQIGVFL ALGGGWKDTA KH
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