Gene PputGB1_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0198 
Symbol 
ID5867894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp235045 
End bp235608 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content63% 
IMG OID641545277 
Producttranscriptional factor-related protein 
Protein accessionYP_001666447 
Protein GI167031216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.459127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGTTCG CCACCACTCG CGCCACCCTC AGCCGACAGT GGGCGCTGCT GCGCCAGCTG 
CCCAGCCGCT CTCCAGGCAT TACCAGCGCC GAGTTGGTGT GGCGCCTGCG TGACGTGGGC
TTTACGGTCA GCAAACGCAC CGTCGAGCGC GACCTCAATG AGCTGTCGCT GATCTTTCCG
CTGGAACGTA ATGACAAGAG TATTCCGTTT GGCTGGCACT GGTCGGCCAG TGCCGTGGGC
GAGTTGCGCG GTAACTTCGA CTTGCTCACG CATCTGCGAG GGGATGCGTT GCAACCGGCG
CAGGGAGAAG GCATGGAGTT GGTGGCACGG ATCAGCGATG CACTGGCGCG GCAGTTGCGG
GTTGCCCCCT TGAGCAGCGA TATGCAGCTG ACAGCGCTGG AGCATGGGCA TCGGTTACGC
GCCACGGTGA GCGATGGTTG GCCATTGCGC TGGTGGCTGT TGAGCCATGG GGATGGGGTG
GTGGTGGAGC AGCCTGCTGA CTTGCGTGAA GAGATTGGCA AGATCCTGAG CAGTGCGGCG
GCTCAGTACC AGAGTAGCCT CTGA
 
Protein sequence
MPFATTRATL SRQWALLRQL PSRSPGITSA ELVWRLRDVG FTVSKRTVER DLNELSLIFP 
LERNDKSIPF GWHWSASAVG ELRGNFDLLT HLRGDALQPA QGEGMELVAR ISDALARQLR
VAPLSSDMQL TALEHGHRLR ATVSDGWPLR WWLLSHGDGV VVEQPADLRE EIGKILSSAA
AQYQSSL