Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0198 |
Symbol | |
ID | 5867894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 235045 |
End bp | 235608 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545277 |
Product | transcriptional factor-related protein |
Protein accession | YP_001666447 |
Protein GI | 167031216 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.459127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGTTCG CCACCACTCG CGCCACCCTC AGCCGACAGT GGGCGCTGCT GCGCCAGCTG CCCAGCCGCT CTCCAGGCAT TACCAGCGCC GAGTTGGTGT GGCGCCTGCG TGACGTGGGC TTTACGGTCA GCAAACGCAC CGTCGAGCGC GACCTCAATG AGCTGTCGCT GATCTTTCCG CTGGAACGTA ATGACAAGAG TATTCCGTTT GGCTGGCACT GGTCGGCCAG TGCCGTGGGC GAGTTGCGCG GTAACTTCGA CTTGCTCACG CATCTGCGAG GGGATGCGTT GCAACCGGCG CAGGGAGAAG GCATGGAGTT GGTGGCACGG ATCAGCGATG CACTGGCGCG GCAGTTGCGG GTTGCCCCCT TGAGCAGCGA TATGCAGCTG ACAGCGCTGG AGCATGGGCA TCGGTTACGC GCCACGGTGA GCGATGGTTG GCCATTGCGC TGGTGGCTGT TGAGCCATGG GGATGGGGTG GTGGTGGAGC AGCCTGCTGA CTTGCGTGAA GAGATTGGCA AGATCCTGAG CAGTGCGGCG GCTCAGTACC AGAGTAGCCT CTGA
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Protein sequence | MPFATTRATL SRQWALLRQL PSRSPGITSA ELVWRLRDVG FTVSKRTVER DLNELSLIFP LERNDKSIPF GWHWSASAVG ELRGNFDLLT HLRGDALQPA QGEGMELVAR ISDALARQLR VAPLSSDMQL TALEHGHRLR ATVSDGWPLR WWLLSHGDGV VVEQPADLRE EIGKILSSAA AQYQSSL
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