| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0117 |
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| Symbol | |
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| ID | 5867805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 121099 |
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| End bp | 122226 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545190 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001666369 |
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| Protein GI | 167031138 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0102376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAC ATCCACATGT CTGGATGGGC CTCCTGTTGT GGTCGGTTTT TGGTCAGGCC
AACGCCGCCT GGACCGTGAA CATGCACCCA GGGGCGACGG AGGTCTCCAA CGCCGTCTTC
GACCTGCACA TGACCATCTT CTGGATCTGC GTGATCATCG GCATCGTGGT GTTTGGCGCG
ATGTTCTGGT CGATGGTCAT CCACCGCCGC TCCACCGGCC AGCAGGCCGC GCATTTCCAC
GAGCATACCT GGGTGGAAAT CCTCTGGACC GTGGTGCCCT TCCTGATCCT GGTGGTCATG
GCCATCCCGG CCACCAAGAC CCTGATCGAC ATCTACGACG CCAGCGAGTC GGACATCGAC
ATTCAGGTCA CCGGCTACCA GTGGAAGTGG CACTACAAAT ACCTGGGCCA GGACGTGGAG
TTCTTCAGCA ACCTGGCCAC GCCCGCCGAT CAGATTCACA ACAAAGCCCC CAAGGACGAG
CATTACCTGC TTGAAGTCGA TCAGCCGCTG GTGCTGCCGG TGGGTGCCAA GGTGCGTTTC
CTGGTGACCG CTGCCGACGT CATCCACTCC TGGTGGGTGC CGGCCTTCGC GGTCAAGCGC
GACGCCATCC CCGGCTTCGT CAACGAAGCC TGGACCCGTA TCGAGAAGCC CGGCATCTAC
CGTGGCCAAT GCACCGAGCT GTGCGGCAAG GACCACGGCT TCATGCCGGT GGTGGTCGAG
GTCAAGTCCA AGGCCGATTA CGACACCTGG CTAGGCGAGC GCAAGGCCGA AGCCGCCAAG
CTCAAGGAGC TGACCAGCAA GGAATGGACC CTGGAAGAGC TGGTGGAACG TGGCGACAAG
ATCTACCACA CCACCTGCGT GGCGTGTCAC CAGGCTGAAG GCCAAGGCCT GCCGCCGATG
TTCCCGGCAC TCAAGGGCTC GAAGATCGCC ACCGGGCCGA AGGAAGGCCA CTTGAGCATT
GTCTTCCACG GCAAGCCCGG CACGGCCATG GCGGCCTTCG GCAAGCAGCT GTCGGAAGTC
GACATCGCCG CTGTGGTCAC CTACGAGCGC AATGCCTGGG GCAACAACAA AGGCGACATG
GTCACGCCGA AGGACGTGCT GGCGCTGAAG CAGGCAGAAG CCAAGTGA
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| Protein sequence | MMRHPHVWMG LLLWSVFGQA NAAWTVNMHP GATEVSNAVF DLHMTIFWIC VIIGIVVFGA
MFWSMVIHRR STGQQAAHFH EHTWVEILWT VVPFLILVVM AIPATKTLID IYDASESDID
IQVTGYQWKW HYKYLGQDVE FFSNLATPAD QIHNKAPKDE HYLLEVDQPL VLPVGAKVRF
LVTAADVIHS WWVPAFAVKR DAIPGFVNEA WTRIEKPGIY RGQCTELCGK DHGFMPVVVE
VKSKADYDTW LGERKAEAAK LKELTSKEWT LEELVERGDK IYHTTCVACH QAEGQGLPPM
FPALKGSKIA TGPKEGHLSI VFHGKPGTAM AAFGKQLSEV DIAAVVTYER NAWGNNKGDM
VTPKDVLALK QAEAK
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