Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0116 |
Symbol | |
ID | 5867804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 120088 |
End bp | 120729 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641545189 |
Product | hypothetical protein |
Protein accession | YP_001666368 |
Protein GI | 167031137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0054252 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACATCG CTGCTGTACG CGAGCAGGTA AGCCAAGCCC ATCAACATGA AGGCCAGACC GGCCAATTGA AACAGCGTCT CGAGCTGCAA CTGCCCCACC TGCACCCCTC GATCCAACTG CCTGAGCAGG ACGCCCAGGG TACTTTGGCG CGCTTCGTCA GCGCCTACAT CGACCAGGTT CCGGAATTGC TGGAGGCCGC GCATGAGGTC GCCCGCGAAG CCGGGATCGA ATCGCAGATC AAACCGGTAC TGAAAATTGC CGAAGCCTAC TTCCTGCAAC CGCCCAGTGT GATGCAAGGG CATGTAGGCC TGGACTGCCT GCTGGATGAG GCTTACCTGG CACACCGTCT GGTGGAGGAA GTGAATGACC TGTACATCCG CCACTTCCAG CAGCCGCTGA TCCCGGTCGA CACCACCGTC GCCAACCTGA TTGCCCACCA GTTGATTGGC GAGAGCTTTG CCAACCAGCT GGATGAGGTG GTGCATCACT CGGTTGACGA AATGCTCGAT GACGAGAGCT TTGCGGTGGA ATCGGTGGAG GCTTATCGCG AGAAGCTGAG CAGCCCTGCA ACTGGCGAGG CGTGGAAGCG CTGGCCGTGC CTGTCGCGAC AGCTGGGTGT GGAGCTGGGC CAACCGGCCT GA
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Protein sequence | MNIAAVREQV SQAHQHEGQT GQLKQRLELQ LPHLHPSIQL PEQDAQGTLA RFVSAYIDQV PELLEAAHEV AREAGIESQI KPVLKIAEAY FLQPPSVMQG HVGLDCLLDE AYLAHRLVEE VNDLYIRHFQ QPLIPVDTTV ANLIAHQLIG ESFANQLDEV VHHSVDEMLD DESFAVESVE AYREKLSSPA TGEAWKRWPC LSRQLGVELG QPA
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