| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_2001 |
|---|
| Symbol | |
|---|
| ID | 5876934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | - |
|---|
| Start bp | 2009793 |
|---|
| End bp | 2010518 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 641542346 |
|---|
| Product | sporulation sigma factor SigE |
|---|
| Protein accession | YP_001663609 |
|---|
| Protein GI | 167040624 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000755771 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACTAA AAACAAAAGT AAAAATAGAA ATGCTATTGT TGTGGAAAAA AATCCTTGAT
TTTTTAGATT TATCTGAAGG CATATTTTAT ATTGGAGGAA GTGAAGCATT ACCTCCACCT
CTTTCTGTAG AAGAAGAAAT GTATTTAATT TCAAAGATGG AAAAAGGAGA TAATGAAGCA
AAAACGGTAC TTATTGAAAG AAATTTAAGA TTGGTAGTAT ATATAGCAAA AAAATTTGAA
AACACAGGAG TAGGAATCGA AGATTTAATA TCTATTGGCA CGATTGGACT TATAAAAGCT
ATTAATACTT TCAATCCTAA GAAAAAAATA AAATTAGCTA CTTATGCTTC TCGATGCATT
GAGAATGAGA TATTAATGTA TTTAAGAAGG AATAGCAAAA CTAAATTAGA GGTTTCTTTT
GATGAACCTT TAAATGTAGA TTGGGATGGA AATGAACTTT TGCTTTCAGA TATTTTAGGC
ACTGATAATG AAACAGTTTA TAAATATATC GAAGATGAAG TAGAAAAGGA ATTATTGACT
TCTGCATTAA AGAAATTACC AGATAGAGAA AAAAAGATAA TAGGACTTAG ATTTGGATTA
GAGGGTGGAG TAGAAAAGAC TCAAAAAGAA GTGGCAGATA TGTTGGGAAT TTCACAGTCC
TATATTTCTC GCTTAGAAAA AAAGATTTTA AAAAGATTAA AAAAAGAAAT GAATAGACTA
GTTTAA
|
|---|
| Protein sequence | MQLKTKVKIE MLLLWKKILD FLDLSEGIFY IGGSEALPPP LSVEEEMYLI SKMEKGDNEA
KTVLIERNLR LVVYIAKKFE NTGVGIEDLI SIGTIGLIKA INTFNPKKKI KLATYASRCI
ENEILMYLRR NSKTKLEVSF DEPLNVDWDG NELLLSDILG TDNETVYKYI EDEVEKELLT
SALKKLPDRE KKIIGLRFGL EGGVEKTQKE VADMLGISQS YISRLEKKIL KRLKKEMNRL
V
|
|---|
| |