Gene Teth514_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1583 
Symbol 
ID5875950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp1602990 
End bp1603418 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content37% 
IMG OID641541931 
Productpeptidoglycan-binding LysM 
Protein accessionYP_001663206 
Protein GI167040221 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID[TIGR02899] spore coat assembly protein SafA 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAG ATGGATCTTA TTATAATCCT AACTATCCTA AGTATCCTTA CCATCATCCC 
TATTATCCAC ATCATCCTCA TCCGGGACAT TGTAAGACTT TTTATACAGT GCAGCCAGGA
GATACTATGT GGTCTATAGC GAATATGTTT GGAATAAGTC TTGACTGCTT AATAAGAGCT
AATCCTCAGA TATCGGATCC TAATTTGATA TATCCAGGAC AACAAATTTG CATACCTTTC
TATTGTCCAC CAGTATCTCC AGAAACCTGC AAAACAATAT ACACAGTAAA ACCGGGAGAC
AGTATGTGGT CTATAGCTAA TATGTTTGGT GTAAGTCTTG ATGCATTGAT AAGAGCAAAT
CCACAAATAC CAGATCCCAA TTTGATATAC CCAGGACAAC AAATATGTAT ACCTTCTGCG
AATTGTTAA
 
Protein sequence
MTIDGSYYNP NYPKYPYHHP YYPHHPHPGH CKTFYTVQPG DTMWSIANMF GISLDCLIRA 
NPQISDPNLI YPGQQICIPF YCPPVSPETC KTIYTVKPGD SMWSIANMFG VSLDALIRAN
PQIPDPNLIY PGQQICIPSA NC