Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1583 |
Symbol | |
ID | 5875950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1602990 |
End bp | 1603418 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641541931 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001663206 |
Protein GI | 167040221 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | [TIGR02899] spore coat assembly protein SafA |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATAG ATGGATCTTA TTATAATCCT AACTATCCTA AGTATCCTTA CCATCATCCC TATTATCCAC ATCATCCTCA TCCGGGACAT TGTAAGACTT TTTATACAGT GCAGCCAGGA GATACTATGT GGTCTATAGC GAATATGTTT GGAATAAGTC TTGACTGCTT AATAAGAGCT AATCCTCAGA TATCGGATCC TAATTTGATA TATCCAGGAC AACAAATTTG CATACCTTTC TATTGTCCAC CAGTATCTCC AGAAACCTGC AAAACAATAT ACACAGTAAA ACCGGGAGAC AGTATGTGGT CTATAGCTAA TATGTTTGGT GTAAGTCTTG ATGCATTGAT AAGAGCAAAT CCACAAATAC CAGATCCCAA TTTGATATAC CCAGGACAAC AAATATGTAT ACCTTCTGCG AATTGTTAA
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Protein sequence | MTIDGSYYNP NYPKYPYHHP YYPHHPHPGH CKTFYTVQPG DTMWSIANMF GISLDCLIRA NPQISDPNLI YPGQQICIPF YCPPVSPETC KTIYTVKPGD SMWSIANMFG VSLDALIRAN PQIPDPNLIY PGQQICIPSA NC
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