Gene BcerKBAB4_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_3654 
SymbolxerC 
ID5843866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp3704749 
End bp3705654 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content37% 
IMG OID641378775 
Productsite-specific tyrosine recombinase XerC 
Protein accessionYP_001646453 
Protein GI163941569 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000489449 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTGA ATGTGAAGAA ATTGTTACAA TTATTCGTTG GATATTTACA AATTGAAAGA 
AATTATTCAA AATATACAAT TGCAAGTTAT CAAAATGATT TAGAACATTT TGTGCAATTT
ATGGAGCGAG AAGGCATATC CTCTTTTTTA GATGTTACAT ACGCGGATGT TCGTTTATAC
TTGACGACGT TGCACGATCA GAAGTTAGCC CGTAAATCTG TCGCAAGGAA AGTATCAAGC
TTACGAAGTT TATATCGTTT TTTGATGCGT GAAGGTTATC AAAAAGATAA TCCGTTTGCA
CTTGCGTCAC TTCCCAAGAA AGAATTGTCA ATCCCAAAGT TTTTATATGC TGAAGAGTTA
GAGGAATTGT TTGAAGTTTC TGATACAGGG GCACCATTAG GTCAAAGGAA TCAAGCTTTA
TTAGAGTTGA TGTATGCAAC TGGGATTCGT GTAAGCGAAT GCGTTAATTT GCAACTTACC
GACATTGACT TTGCAGTGGG AACAATTTTA GTGATGGGAA AAGGGAAAAA ACAAAGATAT
ATTCCGTTCG GAAGCTATGC ACAAGATGCT TTAATTACTT ATATAGAGAA CGGGAGAAAA
CAGTTAGCTC AAAAGACTGA AGAACAATCT CATATGGTAT TTTTAAATGC GAAAGGTAAG
CCGTTAACAG ATCAGGGTGT ACGTTATGTT TTGAACGAAC TCATTAAGAA AGCTTCACTT
ACAATGCGGA TAAGTCCCCA TATGCTAAGG CATACATTTG CTACACATAT GTTGGATGAA
GGAGCGGATT TACGTACTGT GCAGGAGCTA TTAGGTCATG AGAATTTGTC AACCACACAA
ATTTATACGC ATGTCTCTAA AGAAAGATTG CGTTCTGTGT ACATGAAGCA TCACCCGCGG
GCATAA
 
Protein sequence
MDVNVKKLLQ LFVGYLQIER NYSKYTIASY QNDLEHFVQF MEREGISSFL DVTYADVRLY 
LTTLHDQKLA RKSVARKVSS LRSLYRFLMR EGYQKDNPFA LASLPKKELS IPKFLYAEEL
EELFEVSDTG APLGQRNQAL LELMYATGIR VSECVNLQLT DIDFAVGTIL VMGKGKKQRY
IPFGSYAQDA LITYIENGRK QLAQKTEEQS HMVFLNAKGK PLTDQGVRYV LNELIKKASL
TMRISPHMLR HTFATHMLDE GADLRTVQEL LGHENLSTTQ IYTHVSKERL RSVYMKHHPR
A