Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_3304 |
Symbol | |
ID | 5843516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 3362998 |
End bp | 3363723 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641378429 |
Product | sporulation polysaccharide deacetylase PdaB |
Protein accession | YP_001646107 |
Protein GI | 163941223 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAAC GAAAAATTAT TCTATCAATT TTTTCTTTAA TTTGTGCAGT ACATATATTT CAAGTGGACA AAGTGGAAGC TAAAATGTTG TTAAGAAAAG AGCTAGAGCC AACTGGCTAT GTAACATGGG AAGTGCCAAA TAATGAAAAA ATTATCGCAA TTACATTTGA TGATGGACCG GACCCAACTT ATACACCGCA AGTATTAGAG TTATTACGTC AATATAAAGC GGAAGCGACT TTTTTTATGA TTGGCTTTCG AGTTCAGCGT AATCCGTACT TAGTAAAGCA AGTGTTGAAA GAAGGGCATG AAATCGGAAA TCATACGATG AATCATTTGT ATGCGAGTAA TTCATCAGAT GAAAAGTTAG AACATGATAT TTTAAATGGA AAGAAATATT TTGAAAAATG GGTGAAAGAA CCTTTATTGT TCCGTCCACC AGGTGGATAT ATTAATGATG CTGTATTTAC TACGGCAAAA AGAGCTGGGT ATCAAATTGT TCTATGGTCA TGGCATCAAG ACCCTCGTGA TTGGGCGAAT CCAGGTACAG AATCCATAGT CAATCATGTT GTGAAAAATG CTAAAAGTGG AGATATTGTA CTGTTGCACG ATGGAGGAAG TGATCGTAGT CAAACAGTGG CGGCATTAGC AAAAATTTTA CCTGAGCTGA AAAAGCAGGG TTATCGATTT GTAACAGTTT CGGATTTGTT ACGTTATAAA CATTAG
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Protein sequence | MLKRKIILSI FSLICAVHIF QVDKVEAKML LRKELEPTGY VTWEVPNNEK IIAITFDDGP DPTYTPQVLE LLRQYKAEAT FFMIGFRVQR NPYLVKQVLK EGHEIGNHTM NHLYASNSSD EKLEHDILNG KKYFEKWVKE PLLFRPPGGY INDAVFTTAK RAGYQIVLWS WHQDPRDWAN PGTESIVNHV VKNAKSGDIV LLHDGGSDRS QTVAALAKIL PELKKQGYRF VTVSDLLRYK H
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