Gene BcerKBAB4_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_2200 
Symbol 
ID5842413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp2266396 
End bp2267397 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content38% 
IMG OID641377370 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001645048 
Protein GI163940164 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00388552 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCAAG TTGTTAAAAA AGATGTAAGG TTTTGGTTTG GTGTAACCTT TTTAAGTGTC 
CTTATGATTG TTAGTATTGG TAATACGTTG TTTTTCGATG GGAATATTCG TGAACTAACG
ATGATGTATA ACGCAAAAGG AGAATTAGAG GTTGCTCCAT TTTCACCATC GAGTAAATTT
TGGTTCGGAA GTGATGCGAA AGGCCGCGAT CTTTTTCAAC TAATAATAGA GGGAGCGAAA
TGGACGGTTG GTGCGAGTTT AATTATAGCG ATTTTACGAG TAATTATTGG AGGGGGCATA
GGCTTACTTC TCGGTATGTA TAGTCGGCGT TCTTTTCCAA TTATTTCGTC CTTTTTTGAC
CCATTCAGCA TTGTACCAAT GGTTATGATT TCCTATTTTA TATTAAGGGG AGTTTTAATG
TTCGACAGTG GAGAGGCAGC TGCTCCGTTT CATTTGCGAG TTGCGTTTCA AATTATAGTT
CTTGCATGTC TTGCAGTACC GACAGTTATG TTGTATGTAG CGCAAGAAGT CAAGCGTATT
AAGAAAGAAG AATTTATGTT GGCGGCCACT GTGCTCGGCG GAAGTAAGTG GCAGAGGTTG
AAACGCCATG TATGGCCGCA TATGTTACCA TCATTTCTTT TATTAGTAGC CCAGCAATTT
GTAAGTACTT TATTACTCCT CTTGCATCTT GGTTTGTTAG AATTATTTTT TGGCGGAACA
ATAATTTTTG GTACAGAAGC AGATAGTGTA ACAAAAGAAT GGACTGGCCT AATTGGTCAA
AACTTCCGTC ATTTAACCAC ACATACATGG ATTGTACTTA TACCAATTGC TTTTTATAGC
ATGACAATTT TAGCGGGAAA TCTAGTTAGT AATAGTATGC AAGATGCGAT TAAGCTAGGG
AATGTTAGAA GAGCGAATCG GAAGAAGGAA GAAGTGAAAG TAGAGAAACA AATACAGCCT
ACCATGAATG ATTTTTCATT TCATAGTGAG GTGCAAAAAT AA
 
Protein sequence
MWQVVKKDVR FWFGVTFLSV LMIVSIGNTL FFDGNIRELT MMYNAKGELE VAPFSPSSKF 
WFGSDAKGRD LFQLIIEGAK WTVGASLIIA ILRVIIGGGI GLLLGMYSRR SFPIISSFFD
PFSIVPMVMI SYFILRGVLM FDSGEAAAPF HLRVAFQIIV LACLAVPTVM LYVAQEVKRI
KKEEFMLAAT VLGGSKWQRL KRHVWPHMLP SFLLLVAQQF VSTLLLLLHL GLLELFFGGT
IIFGTEADSV TKEWTGLIGQ NFRHLTTHTW IVLIPIAFYS MTILAGNLVS NSMQDAIKLG
NVRRANRKKE EVKVEKQIQP TMNDFSFHSE VQK