Gene BcerKBAB4_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5606 
Symbol 
ID5839548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp207859 
End bp209031 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content34% 
IMG OID641374754 
Productintegrase family protein 
Protein accessionYP_001642550 
Protein GI163943320 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAC AAAATGAAAA AGAGAACTTA CTTATAATAA ATAATCAAAG TGAAAATATA 
GATACATATG TAGAAAACAT AAGAGATATG GTTCCATTCC TGCATAATAA TCGTTATGTA
GATAAAGTAG AAGAGAAGAT GGAGGTTGCA GAAAAAGAGG GAAAGAGTAA ATATACGTAT
TTAAGTGATC TGGAAGTCAT TTATCATTTC ATACATTTAC AAAAAGATAT GGATGAGAAT
AAGAATAGAA AAGAGGATAC GAAAAAGAGT TATGTTTCTG AAATCTTATC ATTTTGTCAG
TGTATGGTGC AGCATGCAGA AGAATTCGAA TTGAATGGAG AAGAGGTACA GCAAAATACT
TCTTTATTAA AAACATTACA ACCTTGGCAT ATTCGTAAAT ATAACTCCTG GTTGAAACAA
GTAGAGAACG GTAGGAATGG GGACACATAT GCAGTTGCAA CACTTGCCAA GAAAACAGTG
CTCATTCGTT CTTTTTTAAA ACACCTTCAT GTATTTGCTT ATATCGAAAA ACCCCTTCAT
GAAGAACTGC AGCGCGCAAA TGTAAATGAA CAGGATCGGC CAAATCGGGA CCTATCTTAT
GATGAAGTTA TGAAAATCTT AGGGTTTTAT AAAGAAAGAG GACATTTAGT AAACTATACC
ATTTTACTAG CTCTGGCAAG TACCGGTGCA AGAATTCAAG AATTATGCAC AACAAGAGTC
AAAGATTTAC ACTATGACGG AAAGTACTGG TTAAAAGTCA CAGGCAAAGG GGATAAAGTG
CGTGAACTTT TCATTTCGGA ACATTTGTAT CAGTGTATTT GTGAAATGAG ACGAAGAAGA
GGGTTCCAAA CTGTATTGGA TCGAGGAGAT GAAAGTCCTT TATTTGTAAA TCAAAGAGGG
AACTTTTATA ATTCAAAAAC GTTATCGAAT CAGGTAACAG ATATGATAAA AAAGACAAAT
TTAGAGTTTC TGCAGTATCG TGAGAATCCA GTAACGGCGC ATACATTCCG TCATGCATTT
GCAATCATGG CAGTTGAACA AGGAAATGCT GATTTGTATC ATTTAATGCA AACGCTGGGG
CATGAAAACA TTCAAACGAC AAAGATTTAT TTAGAAAAGC ACATGAAACG AAAGAATAAT
GTGGGTACCT CATTTGCAGA TCTGTTAGTG TGA
 
Protein sequence
MDKQNEKENL LIINNQSENI DTYVENIRDM VPFLHNNRYV DKVEEKMEVA EKEGKSKYTY 
LSDLEVIYHF IHLQKDMDEN KNRKEDTKKS YVSEILSFCQ CMVQHAEEFE LNGEEVQQNT
SLLKTLQPWH IRKYNSWLKQ VENGRNGDTY AVATLAKKTV LIRSFLKHLH VFAYIEKPLH
EELQRANVNE QDRPNRDLSY DEVMKILGFY KERGHLVNYT ILLALASTGA RIQELCTTRV
KDLHYDGKYW LKVTGKGDKV RELFISEHLY QCICEMRRRR GFQTVLDRGD ESPLFVNQRG
NFYNSKTLSN QVTDMIKKTN LEFLQYRENP VTAHTFRHAF AIMAVEQGNA DLYHLMQTLG
HENIQTTKIY LEKHMKRKNN VGTSFADLLV