| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4822 |
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| Symbol | |
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| ID | 5833888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 5387440 |
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| End bp | 5388633 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641370619 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001642261 |
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| Protein GI | 163854218 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.47928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0333239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACC ACGACGCTTC CGAAATCTTC GACGTCGTGG TGGTGGGGGG CGGCCCCGCG
GGGGCGATCG CGGCCGCCGA CCTCGCCGCC TCCGGGCGGC GGGTGCTGCT CCTCGACAAG
GCCGGGCGGA TCAAGCCCTG CGGCGGCGCG ATCCCGCCGC GGCTGATCCG CGACTTCGCG
ATCCCCGACG CGCTCCTCGT CGCCCGTATC CGGTGCGCCC GGATGGTGGC GCCGAGCGCG
CGCTCGGTCG ACATGCCGGT CGGTGACGGC TTCGTCGGCA TGGTCGATCG CGAGCATTTC
GATCCGTATC TGCGCGAGCG GGCAGCGCTG GCCGGGGCGG ATCTGCGCGA CGGCCTGTTC
GAACGCATCT CCCGCGAAAG CGCGGGACTC GCCACGGTGC ATTACCGCTC CGGCAAAGGC
GGCGAGGAAC ACCGGGTGCA GGCCCGCCTC GTCATCGGTG CCGACGGTGC GACCTCCACG
GTCGGACGCG CCGAAATTCC GGGGCATGCC CGGATGCGAC AAGTCTTTGC CTATCACGAG
ATCGTCCGGC GTCCCGCGGA GACCGGGCAC GACGGCGCCC GCTGCGATGT CTACTACCAG
GGCCGCCTCT CGCCGGATTT CTACGCCTGG ATCTTTCCGC ATGGCGAGAC CGTCAGCGTC
GGCACCGGCA GCGCCCGAAA GGGCTTCTCC CTGCGATCAG CGATCCGCGA TCTGCGCGCC
GATACCGGCC TCGATGCCTG CGAGACGATC CGCCGGGAGG GCGCGCCGCT TCCGCTCAAG
CCGTTGCGGC GCTGGGACAA CGGACGCGAC GTGCTGCTCG CGGGCGACGC GGCGGGCGTC
GTCGCGCCGG CTTCCGGCGA GGGCATCTAC TACGCGATGC TCGGCGGTCG CCTTGCCGCG
GAGGCGGCGG GCGCCTTCCT CGCCACCGGC GATGCCCGCG CTCTCGCCCA GCCGCGGAAG
CGGTTCATGC GGCTGCACGG ACGCGTCTTC TGGATCCTCG GGATGATGCA GTGGGTCTGG
TATCGCAGCG ACACCCTGCG GGAGCGCTTC GTCTCGATCT GCAAGGACAA GGACGTCCAG
CAGCTCACCT GGGACGCCTA CATGAACAAG GAACTGGTGC GCGCCAAACC CGCCGCGCAT
GCACGGATCT TCTTCAAGGA TCTGGCGCAC CTATTCCGCT GGGTCTCGCC GTGA
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| Protein sequence | MTHHDASEIF DVVVVGGGPA GAIAAADLAA SGRRVLLLDK AGRIKPCGGA IPPRLIRDFA
IPDALLVARI RCARMVAPSA RSVDMPVGDG FVGMVDREHF DPYLRERAAL AGADLRDGLF
ERISRESAGL ATVHYRSGKG GEEHRVQARL VIGADGATST VGRAEIPGHA RMRQVFAYHE
IVRRPAETGH DGARCDVYYQ GRLSPDFYAW IFPHGETVSV GTGSARKGFS LRSAIRDLRA
DTGLDACETI RREGAPLPLK PLRRWDNGRD VLLAGDAAGV VAPASGEGIY YAMLGGRLAA
EAAGAFLATG DARALAQPRK RFMRLHGRVF WILGMMQWVW YRSDTLRERF VSICKDKDVQ
QLTWDAYMNK ELVRAKPAAH ARIFFKDLAH LFRWVSP
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