| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4776 |
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| Symbol | |
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| ID | 5835435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 5335544 |
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| End bp | 5337727 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641370573 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001642215 |
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| Protein GI | 163854172 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.119918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGT CTCGCGGACG CAAACCACGC AGCGAACCCA CCTTCGACAT CCCGGAGGGG
AGTGAGCCGG GCCGCCTCGA CGTGCGCCTG TCGCGCAACG ACCGATCGGC GGGTGGGCCG
CGGGCTTCGG CCGGCCGCCC CGCCTCGGCG CCGAAAGCGC GTGCGCGCAA GGCCTCCGGC
GGCGGCAGCG GCCGGCGCCC GCCGCGGCGG CGCTCCTGGC TCGGCCGTCT GGTCTATGCC
GGTGTCGTCC TCGGCATTTG GGTAGCGATC GGGCTGGCCG GCCTCATCGC CTATCACGCC
TCGCAATTGC CGCCGATCGA CCAGCTCGCG GTTCCGAAGC GCCCGCCCAA CATCGCGATT
CTCGCCAGCG ACGGCAGCCT GCTCGCCAAC CGCGGTGAGA CTGGCGGCCG CGTCGTCTCG
ATCAAGGAAT TGCCGCCCTA CCTGCCGCGC GCCTTCGTCG CGATCGAGGA CCGGCGGTTC
TACGACCATT TCGGCATCGA TCCCGTGGGC ATCGCCCGCG CGATCACCCA GAACCTGACC
CGGCGCGGGG TGGCGCAGGG CGGCTCGACG CTGACCCAGC AGCTCGCCAA GAACCTGTTC
CTCACCCCGG AACGGTCGGC ATCGCGAAAA ATCCAGGAAG CGATCCTGGC GCTGTGGCTG
GAGCACAAAT ACTCGAAGGA CGAGATCCTC GAACTCTACC TCAACCGGGT CTATTTCGGT
GCCGGCGCCT ACGGCGTCGA GGCCGCGGCG CAGCGCTATT TCGGAAAGCC CGCCAAGAAC
GTGACCCTGG CGGAGGCCGC CATGCTCGGC GGCCTCGTGC AGGCGCCCTC GCGGCTTGCG
CCGAACCGCA ACCTGAAGGC GGCGCAGGCC CGCGCGGCCC AGGTGCTCGC GGCGATGGAG
GAACTGGGCT TCGCCAAGAG CGCCGACGCG AAGGTCGCAC TGGCCCAGCC GGCCCGGCCC
GCCTCGACCC GCGGCGGCGG CTCGCCGAAC TACGTCGCCG ACCTCGTGAT GGACGTGCTC
GACGACTTCC TGCCGAAGTT CGACGAGGAC ATCGTCGTCG CCACCACCGT CGATGCGAGC
ATGCAGACGG CCGGCGAGAA GGCGCTCACC GACGAACTCA ACGCCAAGGG CGGCCGCTAC
AACGTCGCCC AGGGCGCGCT CGTCTCGATG CGGCCGGACG GGGCGATCCG TGCGCTCGTC
GGCGGGCGCG ACTACGCGCA GAGCCAGTTC AACCGCGCCA CCACCGCCAA GCGCCAGCCG
GGCTCGGCCT TCAAGCCCTT CGTCTACCTC GCCGCGGTCG AGCGCGGCCT GACCCCCGAC
ACGATGCGCG AGGACGCGCC CGTGCGGATC GGCAACTGGG CGCCGGAGAA CTACTCGCAC
AATTATCGCG GCGCGGTTTC CTTGCGTGAG GCGCTGGCGC TCTCGCTCAA CACGGTGGCG
GTGAAACTCG GCCAGGAGGT CGGCCCGAAG GCGGTGGTGC AGACCGCCCA GCGGCTCGGC
ATCTCGTCCT CGCTCCAGGC CAACGGCTCG ATCGCGCTTG GCACTTCGGA GGTGACGCCG
CTCGAACTGG TGGGCGCCTA CTGCGCCTTC GCCAATGGTG GCACCGGCGT GATTCCCTAC
GTCATCGCCA GCATCAAGAG CGCCACCGGC AAGGTGCTCT ACAAGCGCGG CGAGGGCGGG
CTCGGCCGCG TCATCGACCC CAACGCCGTG GGCATGATGA ACGCCATGAT GCACGACGTC
TTCACCATGG GCACGGCAAA GAAGGCCGAG ATCCCCGGCT GGGAGCTGGC CGGCAAGACC
GGCACCAGCC AGGAGTTCCG CGACGCGTGG TTCGTCGGCT ACTCCGCGAC GCTGGTAACC
GGGGTCTGGC TCGGCAACGA CGACGGCGAG CCGACCAAGC GCGCCTCGGG CGGCAGCCTG
CCGGTGGAGA TCTGGAAGGC CTACATGACC ACGGCGCTCA AGGGCGAGAA GCCGGTGGGC
CTGCCGGGCA TGAACCGCTG GCGGGCGCCG CGGCCCGAGG CGCAGCCTGA GCGCGATTCC
GGCCCCGGCG GCCTGATCGG CGCGCTGCTC GGCGAGCCGG AGCAGACCGC CTCCGCCCTC
CCCCCTCGCT CCGTTCCCCG GGGGCGTGGT CCGAGCCGGG ACGATCGCAA CTTCCTCGAG
AAGCTGTTCG GGGTCGGCGA GTAG
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| Protein sequence | MAQSRGRKPR SEPTFDIPEG SEPGRLDVRL SRNDRSAGGP RASAGRPASA PKARARKASG
GGSGRRPPRR RSWLGRLVYA GVVLGIWVAI GLAGLIAYHA SQLPPIDQLA VPKRPPNIAI
LASDGSLLAN RGETGGRVVS IKELPPYLPR AFVAIEDRRF YDHFGIDPVG IARAITQNLT
RRGVAQGGST LTQQLAKNLF LTPERSASRK IQEAILALWL EHKYSKDEIL ELYLNRVYFG
AGAYGVEAAA QRYFGKPAKN VTLAEAAMLG GLVQAPSRLA PNRNLKAAQA RAAQVLAAME
ELGFAKSADA KVALAQPARP ASTRGGGSPN YVADLVMDVL DDFLPKFDED IVVATTVDAS
MQTAGEKALT DELNAKGGRY NVAQGALVSM RPDGAIRALV GGRDYAQSQF NRATTAKRQP
GSAFKPFVYL AAVERGLTPD TMREDAPVRI GNWAPENYSH NYRGAVSLRE ALALSLNTVA
VKLGQEVGPK AVVQTAQRLG ISSSLQANGS IALGTSEVTP LELVGAYCAF ANGGTGVIPY
VIASIKSATG KVLYKRGEGG LGRVIDPNAV GMMNAMMHDV FTMGTAKKAE IPGWELAGKT
GTSQEFRDAW FVGYSATLVT GVWLGNDDGE PTKRASGGSL PVEIWKAYMT TALKGEKPVG
LPGMNRWRAP RPEAQPERDS GPGGLIGALL GEPEQTASAL PPRSVPRGRG PSRDDRNFLE
KLFGVGE
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