| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4760 |
|---|
| Symbol | |
|---|
| ID | 5834786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5315765 |
|---|
| End bp | 5317105 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641370557 |
|---|
| Product | beta-propeller repeat-containing to-pal system protein TolB |
|---|
| Protein accession | YP_001642199 |
|---|
| Protein GI | 163854156 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.577654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGAA CAGCCTTCAC CCGGCGCACC CTCCTGCCGG CGCTCACGGC CGCGCTCGGC
GTCCTCGCCC TGGCGCTGCC CGCCGCGACA CCGGCGCGGG CGCAGCTGCA GCTCCGCATC
GGCAGCGGCG CCTTCCAGCC GATGCCGATC GCCGTCGCCG ACTTCGCCGG TGACGCCAGC
CTCGGCACAT TGGTCGCCAG CGTCATCACG AACAATCTGC GCCGCTCCGG CTACTTCACG
CCTCTGGAGA AGGGGCGCTT CCCCGAGAAC CCGAGCTTCG ACGCCGCGCC GAACTTCGAG
GCGTGGAAGG GCGCGGGCGT CCAGGCGCTC GTGACCGGCC GGGTCGGGCG CGACGCCTCG
GGCCGGCTCA CCGTCGCCTT CCGCCTGTGG GACGTGGCCT CGGGCCAGCA GATCACGGGT
CAGCAATACG GCACCGACGT CGCCAATGCG CGCCGCACCG GGCATCTCGT GTCGGATGCG
GTCTACACCA AGGTCACCGG CCTCGGTCCG TGGTTCGACA GCCGCGTCGC TTTTGTCGAT
GAGTCCGGCC CGAAGGAGAA CCGCCGCAAG CGCCTGATGG TGATGGATCA GGACGGCGCC
AATGTCCGCG CGCTGACCGG GGGCGGCGAC GTCTCGGTGG TGGCGCCGCG CTACTCGCCG
GCGGGGCAGG ACATCGCCTT CATGACCCAG GCGCCGGGCC AGCAGCCCAA AGTCCAGATG
ATCGATCTGG AGACCGGCAA GCGTCAGACG GTCGGCAACT TCGCCTCGAT GAGCGCGAGC
CCGCGCTTCT CGCCGGACGG GCGCCGCCTC GTGATGAGCG TGCAGCAGGG CGGCAACGCC
GACATCGTCA CCGTCGATAT CGCCTCGAAG GCGCAGACGC CGGTCACGCA AGGTCTCGCG
ATCGACACCT CACCGAGCTA CGCGCCGGAC GGCAGCCAGA TCGTGTTCGA GTCCGACCGC
GGCGGCTCGC AGCAGATCTA CGTGATGGGC GCCGACGGCT CGAACCCGCG CCGGCTCTCC
TTCGGCGAAG GCTCGGCCTC GCAGCCGGCT TGGTCGCCCC GCGGCGACCT CATCGCCTTC
ACCCGGCAGC GCAAGGGGGG CTTTGCCATC TGCGTGATGA AGCCCGACGG CTCGGGCGAG
CGGGTGCTGA CCGAGGGCTT CCACAACGAG AGCCCGACCT TCGCGCCGAA CGGCCAGTAC
GTGATGTTCT TCCGCGATCC CGGCGGGCAG GGCGGCGGCA AGCTCTACAT GGTCGACATC
ACCGGCAAGG TGGAGCAGCC GGTGCCGACC CCGTCCTTCG CCTCGGACCC GACCTGGTCG
CCGTTGTTGT CGGGCAAGTA A
|
|---|
| Protein sequence | MPGTAFTRRT LLPALTAALG VLALALPAAT PARAQLQLRI GSGAFQPMPI AVADFAGDAS
LGTLVASVIT NNLRRSGYFT PLEKGRFPEN PSFDAAPNFE AWKGAGVQAL VTGRVGRDAS
GRLTVAFRLW DVASGQQITG QQYGTDVANA RRTGHLVSDA VYTKVTGLGP WFDSRVAFVD
ESGPKENRRK RLMVMDQDGA NVRALTGGGD VSVVAPRYSP AGQDIAFMTQ APGQQPKVQM
IDLETGKRQT VGNFASMSAS PRFSPDGRRL VMSVQQGGNA DIVTVDIASK AQTPVTQGLA
IDTSPSYAPD GSQIVFESDR GGSQQIYVMG ADGSNPRRLS FGEGSASQPA WSPRGDLIAF
TRQRKGGFAI CVMKPDGSGE RVLTEGFHNE SPTFAPNGQY VMFFRDPGGQ GGGKLYMVDI
TGKVEQPVPT PSFASDPTWS PLLSGK
|
|---|
| |