Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4550 |
Symbol | |
ID | 5832801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 5082322 |
End bp | 5082621 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641370344 |
Product | GGDEF family protein |
Protein accession | YP_001641989 |
Protein GI | 163853946 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0112555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGAGCAG AAAAGAAGCC GCCCGGCATC GTGAACCTGG GCCCCGACGC CTGCCTCGTC CGGCTTGGCA GCGAAGTGTT CGTTCTGCTC GTGCCCGAAC GAAGCTCGGC CGAGGCGCGC TGGCTCGCCG ACGAGATCCA TTACGCGGTC GCTCGTGTGG ACGATCCTCC GGCCTGGGCC ATCAGCCTCG GCGTCAGTGC GGTCGAGCCG GGCGAGACGG ACGTTTCCGC CGCCATCGAG GGGGCCGACC GCTCCCTCTG TCGCGCTAAG GCACAGGGGC GTGACCGTGC CGCGGCCTGA
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Protein sequence | MGAEKKPPGI VNLGPDACLV RLGSEVFVLL VPERSSAEAR WLADEIHYAV ARVDDPPAWA ISLGVSAVEP GETDVSAAIE GADRSLCRAK AQGRDRAAA
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