| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4540 |
|---|
| Symbol | |
|---|
| ID | 5831281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 5071373 |
|---|
| End bp | 5072260 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641370334 |
|---|
| Product | LysR substrate-binding |
|---|
| Protein accession | YP_001641979 |
|---|
| Protein GI | 163853936 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.225114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCGC TCAATCCGTC GAACCTCGAT CTCGATCTCA TCCGTACCTT CGTGACGATC
TGCGAGGCCG GCACCTTCGC CCGCGCGGCC GAGCGGGTCG GGCGCACGCC CTCGGCGATC
AGCCTTCAGG TCAAGCGCCT GGAGGAGCGT CTGGGCCGGG CGCTGTTCCT GCGGCAGCCG
CGCGCCGTCG TGCCGACGGC GGACGGCGAG GCGCTGCTCG GCCTCGGCCG GCGCCTGCTC
GCCTTGAACG ACGAGGTGGT GACCTTCTTC GACGCGCCGC CGATGGAGGG GCGGGTGCGG
TTCGGCGCGC CCCACGATTC CGGGTTGTTC GCCCTGCCGG CGATGCTGCG CCGCTTCGCT
GCCACCCATC CGCAGGTCGA GGTCGATGTC CGGCTCGATG CGAGCCGCCT TCTGGTGGAG
GCCATCGCCG ATGGCGCGCT CGATCTCGTG CTCTTTGCCG GCCATCTCCC GTCGGACCGC
GCGGCGCAGG TGGTCCATTC GGAGGATCTG GTCTGGGTCG GTCTGCGCGG TGGCCTCGCG
GAGGCACGCC GGCCCCTGCC GCTCGCGCTC TGCCAGAGCG GCTGCACGTG GCGGGCGGCG
GCGCTCGACG CGCTCGATCA GGCGGGCATC GCCTACCGGG TCGCCTATAC GAGCGAGCAT
TGCCAGGGCC AGATCGCGGC GGTGGAGGCG GACCTCGCGG TGGCGCCGCT TCCGTTGAGC
GTCGCGCGAC CGCCCTTCCA GCGGATCGCG GCCCTGCCAC CGCTCGGCAG CTACGACGTG
CTGATGCGCC TGCGCGACGG TGCCGGACCG GCGGCGCGGG CGCTCGCGGG CCATGTGGCG
GACAGTTTTC GCGATCTTCC CGGCCTCGGC AGCCGCCTCT TCGCCTGA
|
|---|
| Protein sequence | MNALNPSNLD LDLIRTFVTI CEAGTFARAA ERVGRTPSAI SLQVKRLEER LGRALFLRQP
RAVVPTADGE ALLGLGRRLL ALNDEVVTFF DAPPMEGRVR FGAPHDSGLF ALPAMLRRFA
ATHPQVEVDV RLDASRLLVE AIADGALDLV LFAGHLPSDR AAQVVHSEDL VWVGLRGGLA
EARRPLPLAL CQSGCTWRAA ALDALDQAGI AYRVAYTSEH CQGQIAAVEA DLAVAPLPLS
VARPPFQRIA ALPPLGSYDV LMRLRDGAGP AARALAGHVA DSFRDLPGLG SRLFA
|
|---|
| |