| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4426 |
|---|
| Symbol | |
|---|
| ID | 5833460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4921461 |
|---|
| End bp | 4922921 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641370219 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_001641865 |
|---|
| Protein GI | 163853822 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CCCTTGCGAT CATCGCGCTC GCCGTCGTGG TGGCGCTCGG CCTCGGCCTG
CGGGCGCGGT CGGGTCACGA CATGGACATG GAGCAGTGGA GCGTGGGCAA GCGCGGCTTC
GGCACGCTGC TCGTCTTCCT GCTGATGGCA GGCGAGATCT ACACCACCTT CACCTTCCTC
GGCGGCTCGG GCTGGGCCTA CGGCAAGGGC GGGCCGACCT ACTACATCCT CTGCTACCTG
ACGCTGATCT ACGTCATCTC CTACTGGATC CTGCCGCCGG CCTGGCGCTT CGCCAAGGAG
CGCAACCTGT TCTCGCAGCC CGATTATTTC GCCGCGCGCT ACGACAGCCG CAGCCTCGGT
ATCCTGGTGG CGCTGGTCGG GATCGTGGCG CTCGTCCCCT ACATGGTGCT CCAGCTCAAG
GGGCTCGGCA TCATCGTCGC CACCGCCTCC TACGGCGCGA TCTCGCAGAC CCTGGCGATC
TGGATCGGCG CGGCGGTGCT GACCGTCTAC GTGATGGTCT CCGGCGTGCG CGGCTCGGCC
TGGACCGCCG TGCTCAAGGA TTTCATGATC CTGTTCGTGG TGATCTTTTT GGGGATCTAT
CTGCCGTATC ACTACTACGG CGGCATCGGC CCGATGTTCG AGGCCATCGA TACGGCCAGG
CCCGGCTTCC TCGCGCTGCC GGACCGGGGC CAGAGCGCGA CGTGGTTCGC CTCGACCACG
CTGCTCACGG CGCTCGGCGG CTGGATGTTC CCGCACATCT TCGCCTCGAT CTACACCGCG
AGCGATGCGC GCACGTTCCG GCGCAACGCG GTGTTCCTGC CGCTCTACCA GCTCATGCTG
CTGTTCGTGT TCTTCGCCGG GTTCGCGGCC GTGCTGCAGG TGCCGGGGCT GACCGGGCCG
GACGTCGATC TCTCGCTGTT CAGGATCGCG CTCCAGACCT TCCCACCGTG GTTCGTCGGC
GTCATCGGCG CCACCGGCGT GCTGACCGCC CTGGTGCCGG GTTCGATGAT CCTGATCGCG
GGTTCGACGC TCATCGCGCA GAACCTCTAC CGGCCGCTGG CGCGCAACGC GACCGACGCC
ACCACAGGTA AACTCGCCAA GGGGATCGCG CCGCTGCTGG CGATCGCCTG CGTCGGCTTC
ACCCTCTACG GCGGTGAGAC CATCGTGCAG CTCCTGCTGA TCGGCTACGC GGTCGTCACG
CAGCTCTTCC CGGCCTTCTT CTTCAGCCTG TGGACCTACA ACCCGCTCAC GCGGGCGGGG
GCGATGGCCG GCATCCTGGC GGGGGTGGCC GCGGTGGCGG TGACCGTGCT CGGCGGCTAC
ACGCTGGCCA AGCTCTTCCC CGGCCTGCCG GGGCCGGTAC AGGATCTCAA CATCGGCGTG
GTGGCACTCG CCCTCAACCT CGCCGTGGCC TTCGCCGTCA GCCTGCCGGG CAAGCGCACG
CGGCAGACGG CTTTGTCCTG A
|
|---|
| Protein sequence | MNAALAIIAL AVVVALGLGL RARSGHDMDM EQWSVGKRGF GTLLVFLLMA GEIYTTFTFL
GGSGWAYGKG GPTYYILCYL TLIYVISYWI LPPAWRFAKE RNLFSQPDYF AARYDSRSLG
ILVALVGIVA LVPYMVLQLK GLGIIVATAS YGAISQTLAI WIGAAVLTVY VMVSGVRGSA
WTAVLKDFMI LFVVIFLGIY LPYHYYGGIG PMFEAIDTAR PGFLALPDRG QSATWFASTT
LLTALGGWMF PHIFASIYTA SDARTFRRNA VFLPLYQLML LFVFFAGFAA VLQVPGLTGP
DVDLSLFRIA LQTFPPWFVG VIGATGVLTA LVPGSMILIA GSTLIAQNLY RPLARNATDA
TTGKLAKGIA PLLAIACVGF TLYGGETIVQ LLLIGYAVVT QLFPAFFFSL WTYNPLTRAG
AMAGILAGVA AVAVTVLGGY TLAKLFPGLP GPVQDLNIGV VALALNLAVA FAVSLPGKRT
RQTALS
|
|---|
| |