Gene Mext_4089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4089 
Symbol 
ID5831737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4549085 
End bp4549432 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content68% 
IMG OID641369880 
Productflagellar motor switch protein FliN 
Protein accessionYP_001641530 
Protein GI163853487 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00242044 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.543814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCG ACGATTTCAG CCTGCCCCAG CTCAACGAGG GCGACCTGCC CTACGACGAG 
GGCGGCCCCG GTTCCGTCCG CGACGCGCCG ACGAGCCCGA AGAATGCGGC GGACCTCGAA
CAGGTCTTCG ACGTGCCGGT GGTGGTCTCG GCGGTGCTGG GCTCCTCGCG CATGCCGATC
GGCGACCTCC TGCGGCTCGG CCCCGGCGCC GTGCTCGAAC TCGACCGCAA GGTCGGCGAG
GCCATCGACA TCTTCGTCAA CAACCGCCTC GTCGCCCGCG GCGAGGTCGT GCTGGTCGAG
GAGCGCCTCG GCGTCACCAT GACCGAGATC ATCAAGAACG ATCACTGA
 
Protein sequence
MSSDDFSLPQ LNEGDLPYDE GGPGSVRDAP TSPKNAADLE QVFDVPVVVS AVLGSSRMPI 
GDLLRLGPGA VLELDRKVGE AIDIFVNNRL VARGEVVLVE ERLGVTMTEI IKNDH