| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3959 |
|---|
| Symbol | |
|---|
| ID | 5835644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4398268 |
|---|
| End bp | 4399812 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641369750 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001641401 |
|---|
| Protein GI | 163853358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.134116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAAGC GGTCGGTTCT CTGCGCGTCG TTACTTGCCG GCGCCTCTAT TCCCCTCTTC
ATCGGTCCGG TGCTGGCCCA GAGCGGCCCC TTTGCCGCCC CCCTGGAAAC ACGGCCCGTC
ACGGCCACGG AGGCCGCGAC CGCCACGATG CAGGCGGGGA TCGCCGCGTC CCGCAAGAAG
CAGGACGGCC CCTACTTCGC GGCCCAGCCG TCCAAGCCGC CGAACTTCCT CTACAAGGGG
TTCGGCGAGC CGGAGAACTG GCGCATCAGC GGCTCGTTCC GGCCGCGGGT GGAGGGCATC
GCCAACCAGT TCCGCCCAGT GCCGACCTTC GCGGCCAACG ACATCCTGAA CTCGTACCTC
ACCACCCTGC ATGTGGAGTA CGGGATCAAG GGACCGGTGC GCGTCGGCGT CGAGCTGTTC
GACAGCCGCG GCTACTTCCA GCAGCGCAAC TCCTCCGCCT TCACCACGGA GATCAATGCC
CTTGAACCGG GCCAGGCCTA TCTCAACTTC GACACCGGCG ATCTCGGTGA CAACGGCTCG
AAGAGCAGCC TCACGGTTGG CCGCTTCACC AAGAACATCG GCTCGCGCCG CCTCGTCTCG
CGCCAGCAGT TCCGCAACAC CATCAACGCC TATACCGGCG TGAGCTTCGA CTGGCAGGGC
GTGGGCAAGG ACAAGTTCAC GGCGCTGTGG GTGATGCCGC ACACCCGCCT GCCGGACGAC
GTCAACGGCA TCCTCGACAA CGGCATCGAG TTCGACCGCG AGAGCCTGAA CCTGCAGCTC
TTCGGCGCCT CCTACACCTT CGCCAACATC TTCGGCGGCA CGTTCGAGCT CTACGGCTAC
GGCCTCTACG AGCAGGATTC GGGCACCGGC CTGCGCTCGG TCCAGACCCG CGACCGGCGC
CTGTTCACCC CCGGCCTGCG GCTCGCCCGC GCGCCGCGGG TCGGCGAATT CGACTACGAT
TTCGAGGGGA TCTACCAGAC CGGTCTCGCC CGCGAGACCG CCGCGGCCGC CGACCAGCGC
GACCTCACCG TCTCGGCCTA TTTCGTCCAC GCCGAGGTCG GCTACACCCT CGACCACGAG
TGGAAACCGA GGCTGTCGCT GCACTACGAT CACGCCAGCG GCGACCGGGC CAATGACGGC
AAGTTCAGCC GCTTCGACAC CCTGTTCGGC GCCCGGCGCT TCGAGTACGG CCCGACCGGC
CTTTACGGCC CGGTGCAGCG CGCCAACCTG ATCTCGCCCT CGATCCGCGC CGAGATCACC
CCGAGCCCGG TCTGGGACGC CTTCATCGCC TACCGCCCAC TCTGGCTGGA GAGCGCCACC
GACACCTTCG CCGCGACCTT GATCCGCGAC CGCACCGGCC GCTCCGGCAC CTTCGCCGGC
CACCAGATCG AGGGGCGCCT GCGCTACTGG ATCATCCCCA ACGAGATGAT TCTCGATACT
GGCCTCGCCT ATCTCGCCAA GGGCGACTTC CTGCGCAACG CGCCCAACGC GCCCGATACC
GGCGACACCT TCTACGGCTA TCTCAACACG ACGCTGTTCT TTTGA
|
|---|
| Protein sequence | MVKRSVLCAS LLAGASIPLF IGPVLAQSGP FAAPLETRPV TATEAATATM QAGIAASRKK
QDGPYFAAQP SKPPNFLYKG FGEPENWRIS GSFRPRVEGI ANQFRPVPTF AANDILNSYL
TTLHVEYGIK GPVRVGVELF DSRGYFQQRN SSAFTTEINA LEPGQAYLNF DTGDLGDNGS
KSSLTVGRFT KNIGSRRLVS RQQFRNTINA YTGVSFDWQG VGKDKFTALW VMPHTRLPDD
VNGILDNGIE FDRESLNLQL FGASYTFANI FGGTFELYGY GLYEQDSGTG LRSVQTRDRR
LFTPGLRLAR APRVGEFDYD FEGIYQTGLA RETAAAADQR DLTVSAYFVH AEVGYTLDHE
WKPRLSLHYD HASGDRANDG KFSRFDTLFG ARRFEYGPTG LYGPVQRANL ISPSIRAEIT
PSPVWDAFIA YRPLWLESAT DTFAATLIRD RTGRSGTFAG HQIEGRLRYW IIPNEMILDT
GLAYLAKGDF LRNAPNAPDT GDTFYGYLNT TLFF
|
|---|
| |