Gene Mext_3937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3937 
Symbol 
ID5831009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4376855 
End bp4377883 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content73% 
IMG OID641369728 
Productalanine racemase 
Protein accessionYP_001641379 
Protein GI163853336 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.155523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCGA ACTGGCGGGC GCTCGGCGCG TGCGCGCCGC AGGCCGAGTG CGGCGCCGTG 
GTGAAGGCGG ACGCCTATGG CTGCGGCCTC GCGGCGGTCG CCCCGGCCCT ATGGCGGGCG
GGCTGCCGGA CGTTCTTCGT GGCGCACCTC TCCGAGGGCA TCGCCGCGCG GAAAATCCTG
CCGGAGGCCG CGCTCTACGT GCTCAACGGT CTGCCGCCCG GCCGCGCGGA GGCGTTTCGC
GCCCATCGCC TGCGCCCGGT CCTGGGGGAC GCGCAGGAAC TCGCCGAGTG GGCCGAGGCC
ATGCAGGGCG CGGGGCCGGC CGCGCTCCAT GTCGATACCG GCATGAACCG GCTCGGCCTC
TCCGTCGCGG AGGCTCTGGC GCTGGCCGGT GATCCGGTGA TCGCGCGCGC CGGCATCGAC
CTCGTGATGA GCCATCTCGT CAGCGCGGAA CGGCCCGGCG ACCCGCTCAA CGCGCGCCAA
GCCGCCGATT TCGCCCGTGT GCGGGCGGCC TTTCCGCAGA TGCGCGCCTC GCTCGCCAAT
TCCTCGGGCA CCTGCCTCGC GAACGACGCC CGCCACGACC TGCTGCGGCC GGGCTATGCG
CTCTTCGGCG GCAACCCGGA TCCGGGCCAA CCCAATCCGA TGCGGCCGGT GGTGCGGCTG
GAGGCAACGA TCCTGCAGGT CCGTGACGTC GAGGCCGGCG CGACCTGCGG CTACAACGCC
CGCTGGCAGG CCCCGGCCCC GCGCCGGCTG GCCACGCTCT CGCTCGGCTA CGCCGACGGC
TATCCCCGCT CGGCCAGCAA CAGCGGCCAC GCGCTGGTCG GCGGCGTGCC CTGCCCGATC
GTCGGCCTGA TCTCGATGGA CCTCATCATC CTCGACGTCA CCGACGCAAC CCAGGCCCGG
CGCGGCGGCA CCGCCACGCT GATCGGCGAC AGCCTCGACA TCGACACGGT GGGGCACGCC
GCCGGCACCA TCGGCTACGA GATCCTGACG AGCCTGGGTT CCCGTTATGT TCGCAACTAT
GTAGAGTGA
 
Protein sequence
MVANWRALGA CAPQAECGAV VKADAYGCGL AAVAPALWRA GCRTFFVAHL SEGIAARKIL 
PEAALYVLNG LPPGRAEAFR AHRLRPVLGD AQELAEWAEA MQGAGPAALH VDTGMNRLGL
SVAEALALAG DPVIARAGID LVMSHLVSAE RPGDPLNARQ AADFARVRAA FPQMRASLAN
SSGTCLANDA RHDLLRPGYA LFGGNPDPGQ PNPMRPVVRL EATILQVRDV EAGATCGYNA
RWQAPAPRRL ATLSLGYADG YPRSASNSGH ALVGGVPCPI VGLISMDLII LDVTDATQAR
RGGTATLIGD SLDIDTVGHA AGTIGYEILT SLGSRYVRNY VE