Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3937 |
Symbol | |
ID | 5831009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4376855 |
End bp | 4377883 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641369728 |
Product | alanine racemase |
Protein accession | YP_001641379 |
Protein GI | 163853336 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.155523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGCGA ACTGGCGGGC GCTCGGCGCG TGCGCGCCGC AGGCCGAGTG CGGCGCCGTG GTGAAGGCGG ACGCCTATGG CTGCGGCCTC GCGGCGGTCG CCCCGGCCCT ATGGCGGGCG GGCTGCCGGA CGTTCTTCGT GGCGCACCTC TCCGAGGGCA TCGCCGCGCG GAAAATCCTG CCGGAGGCCG CGCTCTACGT GCTCAACGGT CTGCCGCCCG GCCGCGCGGA GGCGTTTCGC GCCCATCGCC TGCGCCCGGT CCTGGGGGAC GCGCAGGAAC TCGCCGAGTG GGCCGAGGCC ATGCAGGGCG CGGGGCCGGC CGCGCTCCAT GTCGATACCG GCATGAACCG GCTCGGCCTC TCCGTCGCGG AGGCTCTGGC GCTGGCCGGT GATCCGGTGA TCGCGCGCGC CGGCATCGAC CTCGTGATGA GCCATCTCGT CAGCGCGGAA CGGCCCGGCG ACCCGCTCAA CGCGCGCCAA GCCGCCGATT TCGCCCGTGT GCGGGCGGCC TTTCCGCAGA TGCGCGCCTC GCTCGCCAAT TCCTCGGGCA CCTGCCTCGC GAACGACGCC CGCCACGACC TGCTGCGGCC GGGCTATGCG CTCTTCGGCG GCAACCCGGA TCCGGGCCAA CCCAATCCGA TGCGGCCGGT GGTGCGGCTG GAGGCAACGA TCCTGCAGGT CCGTGACGTC GAGGCCGGCG CGACCTGCGG CTACAACGCC CGCTGGCAGG CCCCGGCCCC GCGCCGGCTG GCCACGCTCT CGCTCGGCTA CGCCGACGGC TATCCCCGCT CGGCCAGCAA CAGCGGCCAC GCGCTGGTCG GCGGCGTGCC CTGCCCGATC GTCGGCCTGA TCTCGATGGA CCTCATCATC CTCGACGTCA CCGACGCAAC CCAGGCCCGG CGCGGCGGCA CCGCCACGCT GATCGGCGAC AGCCTCGACA TCGACACGGT GGGGCACGCC GCCGGCACCA TCGGCTACGA GATCCTGACG AGCCTGGGTT CCCGTTATGT TCGCAACTAT GTAGAGTGA
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Protein sequence | MVANWRALGA CAPQAECGAV VKADAYGCGL AAVAPALWRA GCRTFFVAHL SEGIAARKIL PEAALYVLNG LPPGRAEAFR AHRLRPVLGD AQELAEWAEA MQGAGPAALH VDTGMNRLGL SVAEALALAG DPVIARAGID LVMSHLVSAE RPGDPLNARQ AADFARVRAA FPQMRASLAN SSGTCLANDA RHDLLRPGYA LFGGNPDPGQ PNPMRPVVRL EATILQVRDV EAGATCGYNA RWQAPAPRRL ATLSLGYADG YPRSASNSGH ALVGGVPCPI VGLISMDLII LDVTDATQAR RGGTATLIGD SLDIDTVGHA AGTIGYEILT SLGSRYVRNY VE
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