| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3887 |
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| Symbol | |
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| ID | 5834405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4315140 |
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| End bp | 4316114 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641369678 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001641329 |
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| Protein GI | 163853286 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.204863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.15793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGC ACGGCGAATT CAGGATTCCG GCCGCCCTGC AGCCGAAGGC CGGCGACTAC
GCCTACGATC TGGAGCGGGC GCTGACCTCG GTCGTGTCCC TCTCCTCGCG GGTGCCGGCG
GAGGCCTTCA CGGCGGAGAC GCTCGGCACC GAGCGGGCGG GCAACGGCGT GGTGATCCGC
GAGGACGGGC TGGTGCTCAC CATCGGCTAC CTCGTGCTGG AGGCCGAGAG CGTCTGGCTC
ACCACCCATG ACGGGCGCTC GGTGCCGGCC CACGTCGTCG GCTATGACGG GGAGACCGGC
TTCGGCCTCG TCCAGGCGCT CGGCCGCCTC GGCCTGCCCG CCCTGAGGCT CGGGCGCTCG
GATACGTTGA AGGTCGGCGA GCGGGCGGTG ATCGCGGGGG CGGGCGGACG CTCGCACAGC
CTCGCGGTCG AACTCGTCGC CCGGCAGGAA TTCGCCGGCT ACTGGGAGTA CGTCCTCGAC
GACGCCCTGT TTACCACCCC CGCCCACCCG CACTGGGGCG GCACCGCCCT GATCGGGCCC
GACGGCGCGC TGGTCGGCAT CGGCTCGCTT CAGCTCCAGC AGGGCGGCAC GGGGGCGGGC
CGGGCGATCA ACATGGTCGT GCCGATCGAA CTCCTGCCGC CGATCCTGAC CGATCTCGAG
ACCCGTGGCC GGGCCGACCG CCCGCCCCGC CCCTGGCTCG GTCTCTACGC CACGGAGACC
GAGGACGGCG TCGTGGTGAT GGGGACCGCG GACAGGGGCC CGGCGGAGGC CGCCGACCTG
CGCGCGGGCG ACGTGCTGAC CGAGGTGGCG GGCGAGCCGG TCGCCGACCT CGCCGGCTTC
TTCCGGCAGG TCTGGGCCCT CGGGGAGGCG GGGGTGCGCG TCCCCCTCAC GGTCAACCGG
GACGGGCGCC TGACCCGGCT CGCGCTGACC TCGGTCGATC GCGAGCGGTT CCTGATCGGG
CCGAAGCTGC ACTGA
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| Protein sequence | MSAHGEFRIP AALQPKAGDY AYDLERALTS VVSLSSRVPA EAFTAETLGT ERAGNGVVIR
EDGLVLTIGY LVLEAESVWL TTHDGRSVPA HVVGYDGETG FGLVQALGRL GLPALRLGRS
DTLKVGERAV IAGAGGRSHS LAVELVARQE FAGYWEYVLD DALFTTPAHP HWGGTALIGP
DGALVGIGSL QLQQGGTGAG RAINMVVPIE LLPPILTDLE TRGRADRPPR PWLGLYATET
EDGVVVMGTA DRGPAEAADL RAGDVLTEVA GEPVADLAGF FRQVWALGEA GVRVPLTVNR
DGRLTRLALT SVDRERFLIG PKLH
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