Gene Mext_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3825 
Symbol 
ID5835275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4247270 
End bp4248100 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content59% 
IMG OID641369616 
ProductGAF domain-containing protein 
Protein accessionYP_001641269 
Protein GI163853226 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0507581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAA CAGCACTGAC ATGGCCCATG CCGCCGGGCC AGAGCGAAAG CCGGCGGCTT 
GCCGCCTTGC ATCGCTTGCA GCTGCTCGAC ACACCACCGG ATCCAGCCTT CGACCGCATC
ACTCAGCTGG CCCAGACCCT CTTCGATGTC CCGATCGCGC TGATTTCCCT GCTCGATGAG
GACCGACAAT GGTTCAAGGC CAAGTGCGGC CTGCACGTCT CGGGCACGCC GCGGGAACAG
GCCTTCTGCA ACTATACGAT CCTGCACGAC AGCGTGTTCG TGGTTCCCGA TGCGCGCGCC
CATGCCGATT TCGCCCTGAA TCCGCTCGTG ACCGGGGAGC CCTTCATCCG CTTCTATGCG
GGTGCGCCCC TCATCGTCGC ACCAGGGACA AGGATCGGCT CGCTCTGCCT CATCGACAGG
AAGTTGCGCG CCTTCAACGA AGAAGACAGC CAGCTGTTAG CCCGATTGGC GCAGGTGGTT
ACAGATGAAA TCTGGTTGAG AACCCTTGCA TCCGGACAGA ACAGGGACTT CCCACATTTC
GCACAGGGTA GGCCGCGTAC CGAAACGCCA TCCCTGATCA CAGGCCTACA GGTTCGTGCG
GCCAGGGCGA TGCTCGGCTG GTCCATCGAC GAGCTGAGCC TGAAAACCGG CCTTTCACCG
AATACCATCA AACGAATGGA GGCGGATGAG CAAAGCCGTC CAAGTAGCCC GTCCACGACA
GTAAAAATCA AGGAGGCTCT GGAAGGCGAA GGGATTGTAT TTCTCGGGCA TGATGCGGCC
GATCCCGGCG TACAACTTGT GAGAAAAATC AGTAACAACA AAGATCAATA G
 
Protein sequence
MTRTALTWPM PPGQSESRRL AALHRLQLLD TPPDPAFDRI TQLAQTLFDV PIALISLLDE 
DRQWFKAKCG LHVSGTPREQ AFCNYTILHD SVFVVPDARA HADFALNPLV TGEPFIRFYA
GAPLIVAPGT RIGSLCLIDR KLRAFNEEDS QLLARLAQVV TDEIWLRTLA SGQNRDFPHF
AQGRPRTETP SLITGLQVRA ARAMLGWSID ELSLKTGLSP NTIKRMEADE QSRPSSPSTT
VKIKEALEGE GIVFLGHDAA DPGVQLVRKI SNNKDQ