Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3825 |
Symbol | |
ID | 5835275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4247270 |
End bp | 4248100 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641369616 |
Product | GAF domain-containing protein |
Protein accession | YP_001641269 |
Protein GI | 163853226 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0507581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGAA CAGCACTGAC ATGGCCCATG CCGCCGGGCC AGAGCGAAAG CCGGCGGCTT GCCGCCTTGC ATCGCTTGCA GCTGCTCGAC ACACCACCGG ATCCAGCCTT CGACCGCATC ACTCAGCTGG CCCAGACCCT CTTCGATGTC CCGATCGCGC TGATTTCCCT GCTCGATGAG GACCGACAAT GGTTCAAGGC CAAGTGCGGC CTGCACGTCT CGGGCACGCC GCGGGAACAG GCCTTCTGCA ACTATACGAT CCTGCACGAC AGCGTGTTCG TGGTTCCCGA TGCGCGCGCC CATGCCGATT TCGCCCTGAA TCCGCTCGTG ACCGGGGAGC CCTTCATCCG CTTCTATGCG GGTGCGCCCC TCATCGTCGC ACCAGGGACA AGGATCGGCT CGCTCTGCCT CATCGACAGG AAGTTGCGCG CCTTCAACGA AGAAGACAGC CAGCTGTTAG CCCGATTGGC GCAGGTGGTT ACAGATGAAA TCTGGTTGAG AACCCTTGCA TCCGGACAGA ACAGGGACTT CCCACATTTC GCACAGGGTA GGCCGCGTAC CGAAACGCCA TCCCTGATCA CAGGCCTACA GGTTCGTGCG GCCAGGGCGA TGCTCGGCTG GTCCATCGAC GAGCTGAGCC TGAAAACCGG CCTTTCACCG AATACCATCA AACGAATGGA GGCGGATGAG CAAAGCCGTC CAAGTAGCCC GTCCACGACA GTAAAAATCA AGGAGGCTCT GGAAGGCGAA GGGATTGTAT TTCTCGGGCA TGATGCGGCC GATCCCGGCG TACAACTTGT GAGAAAAATC AGTAACAACA AAGATCAATA G
|
Protein sequence | MTRTALTWPM PPGQSESRRL AALHRLQLLD TPPDPAFDRI TQLAQTLFDV PIALISLLDE DRQWFKAKCG LHVSGTPREQ AFCNYTILHD SVFVVPDARA HADFALNPLV TGEPFIRFYA GAPLIVAPGT RIGSLCLIDR KLRAFNEEDS QLLARLAQVV TDEIWLRTLA SGQNRDFPHF AQGRPRTETP SLITGLQVRA ARAMLGWSID ELSLKTGLSP NTIKRMEADE QSRPSSPSTT VKIKEALEGE GIVFLGHDAA DPGVQLVRKI SNNKDQ
|
| |