| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3742 |
|---|
| Symbol | |
|---|
| ID | 5832225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4146167 |
|---|
| End bp | 4146676 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641369532 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_001641187 |
|---|
| Protein GI | 163853144 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3760] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.160925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGA GCCCGGACGA CCTGCTGACG CGGCTGCGCG AGCGCGGCAT CGCCTACAAG
CTCTACGAGC ACGAAGCCGT GCTCACCGTC GAGGCGATGA TGGCGATCTG CGGCGACATC
GCCGGCGCCC ACACCAAGAA CCTGTTCCTG CGCGACGGGA AGAAGACCTA CTTCCTCGTC
ACGCTCCAGC ATGACGCGCA GGTCGATCTG AAGGCGTTCC GCGCCGTGCT CGGCGCCCGC
GGCGGCCTGT CCTTCGCGAG CCCCGATGCC TTGCGCGAAC AACTCGGGGT CGAGAGCGGG
GCCGTGTCGC CGCTGGCGGC GCTCAACGCC GCGCCGGGCA GCGTGCGGGT GTTCCTTCAG
GACAGCCTGC TGGCGGAGAC GCGGGTCAAC ATCCACCCGC TCGTCAGCAC CCGCACCCTC
TCGCTCGTCC CGGCCGATCT CGTGGAGGTT CTGCGGGCCG AGGGGCACGA GCCCACGGCG
GTCGCCCTGC CGGAGAGCGC GGCGGCCTGA
|
|---|
| Protein sequence | MPLSPDDLLT RLRERGIAYK LYEHEAVLTV EAMMAICGDI AGAHTKNLFL RDGKKTYFLV
TLQHDAQVDL KAFRAVLGAR GGLSFASPDA LREQLGVESG AVSPLAALNA APGSVRVFLQ
DSLLAETRVN IHPLVSTRTL SLVPADLVEV LRAEGHEPTA VALPESAAA
|
|---|
| |