Gene Mext_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3559 
Symbol 
ID5831105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3938644 
End bp3939393 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content66% 
IMG OID641369353 
Productsugar transferase 
Protein accessionYP_001641010 
Protein GI163852967 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG TTTCCGTTAC CCGACCCCGC CGTACCCTGG CCTTTCCCCG GTTCCGCCCA 
GACGAAGCCG GACAGCGCCG CGCCTTCGAC CTCATCGTGG CAGGCTTTGC CGCCCTCCTG
CTGGCGCCTG TGGCGCTTCT CGTCGCCCTT GCCGTCCTAT TGGAATCGGG GCGGCCAATC
CTGTTCGCGC AGGTGCGGCT CGGGCGCGGT GGGCTGCCTT TTGTGATGTA CAAGTTCCGG
AAGTTCGGCC CTAGAGCTGG CGCCGAGGGA AGCCCGCTTA CTTTGGAAGG GGATGCCCGG
ATGACCACGG TCGGGAAGGT CCTGATGGCG ACCAAGCTCG ACGAACTGCC TCAGATCTGG
AACGTGCTCC GGGGCGACAT GGCAGTCGTC GGCCCCCGCC CCGAGAGCTT GGCGTTCGCG
GATTGCTTCC ATGACGGGTT CGAAGAGGTT CTGGATCATA AGCCGGGCCT CCTCGGACCA
TGCCAGATCC TGTTCCGCAG CGAGAGCACA CTTCACGCAA GGAGCGTTGA CCCACAGCGC
TTCTACCGTG AGGTGCTGTT TCCCGCTAAG GCGCGCGCCG ACATTGCCTA TTTCCGCACC
CGGACGCTCG CTTCCGACTT CGGCGTCACC CTCCGGGGGG GGCTGACCGT CCTGGTCCCA
GGTGTCGTAC CTGAGACTGC CCCGGACGGC ACCGCCCTTG TATCAATTCC GCCCGGAGAC
GCGGGGCCGC CTGTTCAGGG CACGGCCTGA
 
Protein sequence
MTDVSVTRPR RTLAFPRFRP DEAGQRRAFD LIVAGFAALL LAPVALLVAL AVLLESGRPI 
LFAQVRLGRG GLPFVMYKFR KFGPRAGAEG SPLTLEGDAR MTTVGKVLMA TKLDELPQIW
NVLRGDMAVV GPRPESLAFA DCFHDGFEEV LDHKPGLLGP CQILFRSEST LHARSVDPQR
FYREVLFPAK ARADIAYFRT RTLASDFGVT LRGGLTVLVP GVVPETAPDG TALVSIPPGD
AGPPVQGTA