Gene Mext_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3535 
Symbol 
ID5834860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3918740 
End bp3919201 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID641369332 
ProductNLP/P60 protein 
Protein accessionYP_001640989 
Protein GI163852946 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0987599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGCA CAAGGCCTTC AACCCGTATC TCGCGAGTGC GCATGACCGA CCGCATCGCC 
TTCCTCTCGG ACCTGATCGG CCGGCCCTAT CGCATCGGCG CGACGGGGCC GGCCGCCTTC
GACTGCTACG GCCTCGCCCG GCACGTTCAG GCGGCGCTGT ACGACGTGCC GATGCCGGAA
CTGCCCTTTG TCGCGGCTAC GACCCGGCAG CAGGCCGAGG CGATGCTGAA CCACGCCGAG
AGGCAGAACT GGCGCGAGAT CCCCGAGCAC GAGGCCCAAG ACGGCGACCT CGTGCTGATG
GGCAACGTCG CCAAGCGGGA CTTCCACCTC GGCACCTACG TCGTGCCCGG AACGGCCGGC
GTGGTGCTGC ACATCGACGA GCAGAACGGC GTGGTGGCCG ATGATTTGCC GTCGCTGCGC
GCAATCGGCT TCCACTACCT GCGGATCTTC AGGCGCGCCT GA
 
Protein sequence
MCRTRPSTRI SRVRMTDRIA FLSDLIGRPY RIGATGPAAF DCYGLARHVQ AALYDVPMPE 
LPFVAATTRQ QAEAMLNHAE RQNWREIPEH EAQDGDLVLM GNVAKRDFHL GTYVVPGTAG
VVLHIDEQNG VVADDLPSLR AIGFHYLRIF RRA