Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3508 |
Symbol | |
ID | 5833703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3886352 |
End bp | 3887212 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641369307 |
Product | UspA domain-containing protein |
Protein accession | YP_001640964 |
Protein GI | 163852921 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.364633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAC CCGTCTCATC CGCGCTCACT GGCATCCGCG ACGTCTTCGT CGGGATCGCC GTCGAGAACG AGAGCGACAG GGATTCGCCG GCCGTCGGCT ACGGCCTGTC GCTGGCCCGG GCCGCAGGCG CCCACCTGAC GCTTCAATCG GCGTCCTGGC GGCTCTACGG CGACAATCGC TGGATCAGCG GTTTCGACGA CGGGACCGTC GCGGACATCG ACCGCCGCCT CGATCGGCTG GCCCGTGCCA TCGCGGAGCG CACCGCGGGC GATGCGGCGC AGGCGGGCGT CGTGTGCACG ACGGAGACTC CGAGCCTGCA CTATCCAGCC ATCATCCACC GGTTGGCGGA ACAGGCGCGG CTGCACGATC TGGCGATTCT GGATGCATTG GTCTGGACCT GCGACCTCGA CCGCGAGGCA ATCGAGACGA CCCTGTTCAA GAGCGGTCGC CCGGTCATCG CGGTGCCGCC GGGGCACACG GGCTTTGCCG GCCGCCGGAT CATCGTCTCT TGGGACGGAA GCGCCCAGGC GGCACGGGCC GCCAACGATG CGCTGCCGTT CCTGCGTGCG GCCGAGGCGG TCGAGATCGT TTCGATCGGC GACGCGGCGG AGATCCGCGA TTCGGTGCCG GGGGCCGAGT TCGCGCCCCA CCTCGCGCGG CACGGGGTGA ACGTCACCGT CAACAACCTG CCCGTCTCCG GCTCCATCGG CGAAACCCTG CGGAGCCAAG CCGGCCTGTT CCGGGCCGAC CTGATCGTGA TGGGCGCCTA TCGCCATTCC CGCGCGCGCC AGTTCTTCTT CGGCGGCGTG ACCCGCTCGC TACTGCGAAG CTGCCCCGTT CCGCTGTTCC TGTCCCGCTG A
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Protein sequence | MSQPVSSALT GIRDVFVGIA VENESDRDSP AVGYGLSLAR AAGAHLTLQS ASWRLYGDNR WISGFDDGTV ADIDRRLDRL ARAIAERTAG DAAQAGVVCT TETPSLHYPA IIHRLAEQAR LHDLAILDAL VWTCDLDREA IETTLFKSGR PVIAVPPGHT GFAGRRIIVS WDGSAQAARA ANDALPFLRA AEAVEIVSIG DAAEIRDSVP GAEFAPHLAR HGVNVTVNNL PVSGSIGETL RSQAGLFRAD LIVMGAYRHS RARQFFFGGV TRSLLRSCPV PLFLSR
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